Geotrypetes seraphini (Gaboon caecilian): 117359807
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Entry
117359807 CDS
T09159
Symbol
IRX5
Name
(RefSeq) iroquois-class homeodomain protein IRX-5 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117359807 (IRX5)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117359807 (IRX5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
117359807
NCBI-ProteinID:
XP_033798976
UniProt:
A0A6P8RE35
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Position
4:61388943..61396990
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AA seq
503 aa
AA seq
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MCLAMSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTA
SSPGYNSHLQYSTDPAAAAAAAAAFTSYVGSPYDHTTGMAGSLGYHPYATPLSSYPYGDP
AYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
NKMTWTPRNRSEDEEDEENIDLEKNDDEESNKLDEKGDTEGETGEQKRGPGQGECERLES
ENLQEKEADVTRSDLDLKDSEERSDLLSGSSKSSTSSPPPDLCQAAQILQDNEDQPHHHL
HHHHHHHQQHQLLQNHQHHHPMDLVLSSPGSTSSSSSIGSSSSGGSSNVTSVIHSPPTAT
SKPKLWSLAEIATSSDKSKENSQVSPGTGQTLCPSMAANSSPPSRSPSSQCPFPNSAMLS
RPLYYTSPFYPGYTNYSTFGHLHSHHGSNATTAAPSNTHFNGLSQTVLNRAEALAKETKI
RSQSQVDLCKDSPYELKKGMSNI
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttggccatgtcgtatcctcagggctacttataccagccgtcggcttctttggct
ctctactcttgcccggcttacagcaccagcgtgatttcgggacccaggaccgatgaactg
gggagatcttcctccggttcagccttctccccttacgccggatctacagccttcacagcg
tcttctccgggttacaactcccacctccagtacagcacggatccggctgctgccgccgcc
gccgctgccgccttcacgtcctacgtgggttcgccctacgaccacacgacaggaatggct
ggttctttgggataccatccctacgctacgcctttgagctcttatccctatggagatcca
gcttaccggaaaaatgccaccagagacgccacagctacactgaaggcctggctgaatgag
cacaggaagaacccatatccaaccaaaggggagaaaatcatgttagccatcattaccaaa
atgactctaacgcaagtatctacttggtttgctaatgccaggagaagacttaaaaaggaa
aataaaatgacttggacacccaggaacagaagtgaggatgaggaagatgaggaaaacata
gatctggagaaaaatgatgacgaggaatccaataaactggatgaaaaaggagacacggaa
ggtgaaacaggggaacagaagagaggccccggacaaggcgagtgcgagcgtctagagtct
gagaacctgcaggagaaagaagcagatgtcaccaggagtgacttggatttaaaagattcc
gaggaaagaagcgatctcctttcgggctcttccaaatccagcacttcctctcctcccccc
gacctgtgtcaggcagcacagatccttcaagacaacgaagaccagccacaccaccacctc
caccaccaccaccatcaccaccaacagcaccagcttcttcaaaaccatcagcaccatcac
cccatggacctggtcctaagcagccctggcagcaccagcagcagcagcagcattggtagc
agcagcagtggcggcagcagcaatgtgacttcagtgatacattcccctcctactgccact
tccaaacccaaactctggtcgctggctgagatcgccacctcttcagataagtcgaaggaa
aacagccaggtgtctccagggaccggacagacgctgtgcccttccatggctgccaattct
tctcccccttccagatccccttcctctcagtgccctttccccaacagcgccatgctctct
cgtcctctttattatacgtccccattttatccaggctacacaaactatagcacttttggg
caccttcatagccaccacggatccaatgcaaccacggcagcccccagcaacacacatttc
aatggattaagccagactgtcttaaacagagctgaagctttggcaaaagagactaaaatc
cgaagccaatctcaagtagatctttgtaaagactcgccctatgaactgaagaaaggtatg
tccaacatttag
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