Geotrypetes seraphini (Gaboon caecilian): 117359820
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Entry
117359820 CDS
T09159
Symbol
TDRD1
Name
(RefSeq) tudor domain-containing protein 1 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117359820 (TDRD1)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117359820 (TDRD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
DUF4537
SNase
Agenet
TFIID_20kDa
Motif
Other DBs
NCBI-GeneID:
117359820
NCBI-ProteinID:
XP_033799035
UniProt:
A0A6P8QK98
LinkDB
All DBs
Position
4:311602456..312216256
Genome browser
AA seq
1270 aa
AA seq
DB search
MSEWENRRRLHIKESKDFIKPPESLRYPCSSPSYPIKVPEMRHGYLSTSNENFLKSKETK
PHFVDHGGRSRSSNHCENGTNKGELGPKTSGRMIIGKHLDQFPQEIGNTLTNETEINKTI
MSKTEQSVESLSIASSSSLISHLDDVSASHDSGSKPPHASQSKVKNFSEKYFFSGYDLSL
FNSLAPAPAPLTSTCHHCGLHGSQRCAKCKQVYYCSSSCQKEDWSMHSVVCKPVRQIKME
DPCTSLTESRERKNDQQVDFPSLESPNKIGSSIQKKIMLSDLQNYELKKGMKFQGTVHEF
KDPSEFFMQMCSSEVIESLGKLTLALKEKFTNLTGPGEYRPVKGEVCAAKYSYDQNWYRV
LIQEVDLSQRKAQALYIDYGNKEDIDFDRIQPLYKDLELFPPYAIKCCLANIVSKHGGWT
RDCISAARQLLLGGQCHSAIVLDTHQEDSICFAVDIILESGKHLDQLLLEMGYAESNKKI
SLKTGPILDVSLKHIKEKRTESKKELNEDQRLLVPKVISPSMGDEFPAVVAEFKRPEEFF
CQQLQSAHQLTELQVALSEHCRMVPSFLSFSPAASDICCAQFTEDNQWYRATVLEYVSDD
TALVGYVDYGNCEVISVSRLRPIITKFMELPIQAIKCTLAGVKPLSKTWKPEAVTLMKQL
VNNKIVTVKVVDKDDTTLVVDLIDESVSPCVNVACRLIKMGFAAEERNSKVVESETSNLA
EKKINEIIEKSDWAWSELPVNQVTAVRVCMLYNPGDFYCQLYKEEDLYVLNKLNMSLVKY
CQETHTSVFKPEKGKICCAFFSGDENWYRGMVKEVSPEGAIKVHFVDYGNVEEVALEKLH
EISSEFLKLPFQAIRCKLAGVIPVSKEWSREATERFRTYVNGVKLQACTVYVEKDKVAVE
ILDNSSECLQSINKLLITEHMAVKEDDKLEIPKMELAGAASAVPNMELAGAASAVPKMEL
AGAATAVLKMELAGAVSAVPKMELAGAISAVPRPGSMVNMMLGAEHGDGVESTGIFMAGQ
WKTMELPVNTVISGHVLEVKSPDLFYVLPNENTVNKDKLQWIMIEMAEYCSHQDNKQVYQ
PKTGEACCAKFTGDNHWYRAVVLDNLESAVKVVYVDYGNVENLPFSRILPIKASYLQLPF
QIIKCSIAGLVASTGVWSSLAKEMLRKLMLGNSIVATVLRIVDNTHVLSVEVEIKDERVN
IAEKLVKENLAKCSNSKIHPPDLEQKDEHCYRDLRNRVKKLEEIQQALFFFMRKHMKPEE
LSEIRKLMEK
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatgggagaataggagaagactgcacataaaggagagcaaggatttcataaag
cctccagaatctctccgatacccttgctcatctcccagctaccccattaaagttccagag
atgagacatggttacctctcgacttcaaatgagaactttctgaagtccaaagagaccaag
ccacactttgtagaccatggaggcaggtcaagaagctctaaccactgtgagaatggcact
aataagggggagctcggaccaaagaccagtggacgaatgattatagggaagcatctggat
cagtttcctcaagaaataggaaataccttgactaatgaaactgaaattaataaaacaata
atgtcgaagacagagcaatcagtagaaagcctgagcattgcaagcagttcatcattgatt
tcccatttggatgatgtgagtgctagtcatgattctggaagcaagccacctcatgcaagc
cagagcaaggtgaaaaacttttctgaaaagtatttcttctcaggttatgatttgagcctg
ttcaactcgctagcacctgcacctgctcctctgacctcgacatgtcatcactgtggtttg
catgggtcgcaaagatgtgcaaagtgtaagcaggtttattattgttcatcaagctgtcag
aaggaggattggtcaatgcacagtgttgtgtgcaaacctgttagacagattaaaatggaa
gatccttgcacgtcactaactgagtccagagagagaaagaatgatcagcaggttgacttc
cctagtttggaatctcccaataagattgggagtagtatccagaagaaaatcatgctttca
gatttgcagaattatgagctcaaaaagggaatgaaatttcagggtaccgttcatgaattt
aaggatccaagtgaattttttatgcagatgtgttcttctgaagtcattgaaagtcttgga
aaacttaccttggcgctgaaggaaaagttcacaaacttgacaggtccaggggaatatagg
ccagtgaaaggggaagtctgtgctgccaagtactcctatgatcagaactggtacagagtc
ttgatacaggaagtggacttatctcaacggaaagcgcaggcattatacattgattatggg
aataaggaggatattgatttcgacagaattcagcctctatacaaggatcttgaactcttt
ccaccttatgccattaaatgctgtcttgcaaatattgtatccaagcatggaggatggaca
cgagattgcattagtgctgcaagacagctgctgctggggggacaatgccactcagctata
gtcctggacacacatcaagaggatagcatatgctttgcagtagatattatcctagaatcc
gggaagcacctggatcagttgcttctggaaatgggttacgcagaaagtaataagaaaatc
agtctgaagactggtcccattttggatgtatctctgaagcacatcaaagaaaagagaaca
gaaagcaagaaagaacttaacgaagaccaaaggttgctggtccctaaagtgatttcccca
agcatgggagatgagtttcctgctgttgttgctgaatttaaaagaccagaggaatttttt
tgccagcagctacaaagtgcacaccagcttactgagctacaggtagccttgagtgagcat
tgtaggatggtcccttcttttctcagtttttctccagcggcatcagatatctgctgtgca
cagttcacagaggacaatcagtggtacagagccactgttctggagtacgtttcagatgat
actgccttggtgggctatgtggactacgggaactgtgaagtcatttcagtgtctagactt
cgtccaataataacaaaattcatggagctgccaatacaggctataaagtgtacattagca
ggagtgaagccattgtcaaaaacatggaaaccagaagctgttactctgatgaagcagctg
gtgaataataaaattgtcacagtgaaagtggtggacaaagatgataccactttagtagtg
gatctgatagatgaatccgtgtcaccttgtgtgaatgtggcatgtcgtcttatcaagatg
ggctttgctgcagaagaaaggaatagcaaggtggtggaatctgaaacaagcaatctggca
gaaaaaaaaattaatgaaattatagaaaaatctgattgggcatggtctgagctgcctgtg
aatcaagtaacagctgtcagagtgtgtatgctgtacaatcctggagatttctactgtcaa
ctctataaagaagaagatctatacgtgctgaataaactgaacatgtctttggttaagtac
tgccaggaaacgcacaccagtgtctttaagccagaaaagggtaaaatttgctgtgccttc
ttctcaggtgatgaaaattggtaccgaggtatggtgaaggaggttagccctgagggagct
atcaaagtgcactttgtggattacggcaatgtggaggaagtagctctggaaaaattacat
gagatctcctctgagtttctgaagttacctttccaagcaatccgatgcaaactggcaggt
gtaatacctgtatcaaaggaatggagccgagaagctactgaaagatttcggacatatgtt
aatggggtaaagctgcaagcttgtaccgtttatgttgagaaggataaggtggctgttgag
atccttgataattcttcagaatgtctgcagagcatcaataaattgctgatcactgagcac
atggctgtaaaggaagatgacaaacttgagattccaaagatggagctggcgggcgcggcc
agtgcagtgccaaatatggagctggcgggcgcggccagtgcagtgccaaagatggagctg
gcgggtgcagccactgcagtgctaaagatggagctggcgggcgcggtcagtgcagtgcca
aagatggagctggcaggcgcaatcagtgcagtgccaagaccaggaagcatggtcaacatg
atgctaggagcagagcatggtgatggagtggagtctacaggtattttcatggcagggcaa
tggaagacaatggaactacctgtcaatacagtgatttcaggacatgtactggaggtgaaa
agccctgatctgttctacgttttaccaaatgaaaacacagtgaataaagataaattgcag
tggataatgatcgaaatggcagaatattgcagtcaccaagataacaagcaagtgtaccag
cccaaaactggggaagcatgctgtgctaagtttacaggtgataatcactggtaccgtgca
gtcgtgctagataacttggaatctgctgtgaaggtagtttatgtagactatggaaatgtg
gaaaaccttcccttctcaagaattctgccaatcaaagccagctatctgcaactcccgttt
cagataatcaagtgttccattgcagggttagtggcatcgactggggtgtggtcttcactg
gcaaaagaaatgctgaggaagctcatgctgggtaacagtattgtggccacagtactaaga
attgttgataacacccatgtgctttcggtggaagtggagattaaggatgagcgagtaaac
atagctgagaaactcgtcaaggaaaacctggctaaatgcagtaattccaagattcatcct
ccagatctggaacaaaaagatgagcactgttacagagatcttcggaatcgagtgaaaaag
ctggaagagattcagcaggctcttttcttctttatgaggaaacatatgaaaccagaggag
ctgagtgaaattcggaaacttatggaaaagtag
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