Geotrypetes seraphini (Gaboon caecilian): 117359848
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Entry
117359848 CDS
T09159
Symbol
CDH3
Name
(RefSeq) cadherin-3
KO
K06796
cadherin 3, type 1, P-cadherin
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04514
Cell adhesion molecule (CAM) interaction
gsh04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117359848 (CDH3)
04519 Cadherin signaling
117359848 (CDH3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gsh04515
]
117359848 (CDH3)
Cell adhesion molecules [BR:
gsh04515
]
Cadherins
Major cadherins
117359848 (CDH3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Ig_CLSTN
PBP_1A_C
Motif
Other DBs
NCBI-GeneID:
117359848
NCBI-ProteinID:
XP_033799115
UniProt:
A0A6P8QT80
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Position
4:complement(6379599..6473182)
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AA seq
813 aa
AA seq
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MSVRCFGLLCLLLQVGRGSEARDPRDDVLDSEGVRFRDRQGLVKPQDVDKLSTLVTEKIK
GHLSAKKSTEFPVLTFSHSSHGLRRRKRDWVIPPISVSENERGTFPKILVQIRSNKDKQT
KIFYSITGQGADTPPEGVFIIERLTGVIYVTRPLDREEMSKYTLLSHAVSENGKPIEDPM
DIIVKVTDQNDNRPQFTQQLFRGSIREGVLPGTSVMEVSATDKDDSENTNNGIIAYSILN
QEPKQPAEHMFTINPETGLISVIASGLDRERVREYNLTVQAADMEGKGLSTTASVVIEIV
DANDNAPVFTPSQYVAEVPENKPDIEVHRLSMVDLDEPKSEAWNAVYRIVKGDEGGLFSV
ITDPETNEGILTTAKGLDFESKQQHILHVTVENQVPFTVTLATSTATVSVTVLDVNEAPV
FRPPVTRVDIEEDLPLGRNIASLVAEDPDTQQNQIIRYRIGNDPAGWLVINPETGIVTGK
GNLDRESHFVKNSTYSAIILAVDNGSPPATGSGTLVLYLLDVNDNGPEPNPRNITVCNQN
SQPQILRIIDKDLPPNTSPFTFALSHGSDVNWAAEIVGDTVVLKLLQKLEQGDYNIYLQL
FDNQNKDQLTVLGARVCNCEGQIVTDTCPNRRSEDFIPSTVLIVLGSLLALLILLLLLLL
LLRRRRRVVKEPLLLPEDDTRDNIFYYGEEGGGEEDQDYDLSQLHRGLDARPEVTRNDVI
PTLMPLPQYRPRPANPDEIGDFIDENLKAADNDPTAPPYDSLLVFDYEGSASEAASLSSL
NSSGSDGDQDYDCLNDWGPRFKKLADMYGGEED
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtccgctgcttcggcctcctctgcctcctcctgcaggtgggaagagggtcggag
gcgagagacccgcgtgacgacgtgctggacagcgaaggggtgcgcttcagggatcgccaa
ggactggtgaagccacaggatgtcgacaagctttccactttggttactgagaagatcaag
ggtcatctgtctgcaaagaaaagtactgagtttccagtgctgacgttctcacattctagt
catggactgaggagaaggaagagagactgggtgatcccccctatcagtgtgtcggaaaac
gagaggggtaccttccccaaaatcctggttcagatcagatccaacaaggacaaacagaca
aagattttttatagcatcacaggacaaggtgctgacaccccccctgaaggagtcttcatt
atcgaaagattaacgggtgtcatctatgtgacacggccactggacagagaggagatgagc
aaatacacgctgttatcacatgcggtgtccgaaaatgggaaacccatcgaggacccgatg
gacatcatcgttaaggtgactgatcagaatgataacaggccacagttcacccaacaactc
ttcagggggtccataagagaaggggttttaccaggaacctctgtgatggaggtgtctgct
acagataaggatgactcggagaacacgaacaatggcatcattgcttattctatcctaaac
caggagcccaaacaaccggcagagcacatgttcaccatcaacccagaaacaggcctcatc
agcgtgattgcaagtggcctggatagagagagagtccgagaatacaacctgacggtgcag
gctgctgacatggaggggaagggactgtcaaccacagcttcagtggtgattgagatcgta
gacgctaatgataatgcaccagtcttcacccccagtcagtatgtagcagaagtgcctgag
aataagccggacattgaggttcatagactgagcatggtggaccttgatgaacccaagtct
gaagcatggaacgctgtgtatagaatcgtgaagggggatgaaggagggctcttcagtgtg
ataacggacccagaaaccaacgagggcatcctgaccacagccaagggtttagattttgaa
agcaaacagcagcacatcctccacgtcactgtggagaaccaggttccatttactgtgacc
ctggcgacctccacagccaccgtgagtgtcactgtgctggatgtgaatgaggctccagtc
ttcaggccaccggttactcgtgtggacattgaagaggatttgccgttggggcggaatatt
gcctccctcgtagcagaagatccagatacgcagcagaatcaaattatccggtatcgcatt
gggaatgaccctgcgggatggttggttattaatccggaaactggaattgtaacaggaaaa
ggcaacctggatcgggagtcacattttgtgaagaacagcacatacagcgccataatcctg
gctgtggataacggatcgccccctgccacaggttcaggaacactggtcctgtatctcctc
gatgtgaatgacaacggcccagagcccaatcctcggaacattacagtctgtaaccagaac
tcacagccacagatactgagaatcattgataaggatcttccaccaaacacctcccctttc
acgtttgcattaagtcatggatctgatgtcaactgggcagcggaaatcgttggagatact
gtggtgttgaagctgctccagaaattggaacagggagattataacatctatcttcagctg
tttgacaaccagaacaaagaccagctgactgtcctcggtgctcgggtgtgtaactgtgag
ggacaaatagtgacagacacatgccctaaccgtcgcagtgaggactttatcccatcgacc
gttctaatcgtcttgggatcacttctggccctgctcattctcctgctgcttcttctgctg
ctcctgaggaggcggaggagagtggttaaagaacccctgctgctgccagaagatgacact
cgggacaacattttctattatggggaagaaggtggtggagaagaggaccaggattatgat
ctgagccagctgcacagaggcctggatgcgcggcctgaagttacccggaatgatgttatc
cccaccctgatgcctcttccgcagtatcgtcctcggccagccaatcccgacgagattggt
gacttcattgatgagaacctcaaggcagcagacaatgaccccacagccccaccgtacgat
tccctgctggtgtttgactatgaggggagcgcctctgaggccgcatcgctcagctctctg
aattcctccggctcagatggagaccaggattatgactgtctgaatgactggggcccccgc
ttcaagaaactggcagacatgtacggtggggaagaggattag
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