Geotrypetes seraphini (Gaboon caecilian): 117359849
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Entry
117359849 CDS
T09159
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117359849
Membrane trafficking [BR:
gsh04131
]
Protein recycling
Others
Others
117359849
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
117359849
NCBI-ProteinID:
XP_033799116
UniProt:
A0A6P8RE86
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Position
4:complement(301699138..302003505)
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AA seq
879 aa
AA seq
DB search
MRKGETTEDKDAQYITCRMQNCSEAGRSRPFPGYIDPNSLIVQDDYVFVQLTSGGRPHYY
VSYRRESFAQMKLPKYSLPKDMHVISTDENQVFVAIQEWNQNDTYNLYISDTRGVLYTLA
LENVKSSVGPEGNIMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWHLLQAPETDL
RGNTVHCVLPYCSLHLHLKVSDNPYTSGNIASRDTAPGIIVASGNIGSELTDSDISMFIS
SDAGNTWIQIFEEEYSVLFLDQGGVLVAMKHTSLPIRHLWLSFDEGRSWNKYSFTSSPLF
VDGVLGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCVHEDYRPWQLHNQGEACI
MGAKRTYKKRRSERKCMQGKYAGAMSSEPCVCTEADFECDFGYERHSNGQCLAAFWYNPS
SPSKDCSFGQSYLNSTGYRKVVSNNCTDGVREQYTAKRQQCPGKAPRGLRIITSDGKLIA
EQGHNVTFVLQLEEGDVQRTNIQVDFGDGIAVSYANFSSMEDGVKHVYQNVGIFRVMVQV
DNTLGSESAVLYLHVTCPLEHVHLSLPFVTTKNKEVNATVVLWPSQVGTLTYVWWLGNNT
EPLITLEGSISFAFAAEGMNTITVQVSAGNAILQDTKTIAVYEQFQSLRLSFSPNLDDYN
PNIPEWRRDISRVIQKALVEATGIHSKHVLIAVLPGLPTSAELFILPFKDTADEKKRAAD
DLKQISETFISKLNQDFVQFELKPGIQILVHVAHFTAAPLVDLAPSHSGSAMLMLLSVVF
VGLAVFVIYKFKRKIPGINVYAQMQDEKEQEMISPGSQSESLPNVPLSQLMSPEQLLDEK
LDTRAIGSISIAAEKQSTTEICTTTETPTTTEIPTYVNV
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaggagaaaccacagaagacaaagatgcccagtatataacctgccggatgcag
aactgcagcgaagccgggagaagtcgtccctttccagggtacattgaccccaactctctg
atcgtccaggatgattatgtgtttgttcagttaacttcaggagggaggcctcattactac
gtatcatacagaagagagtcttttgcacagatgaagctgcctaaatattccctcccgaag
gacatgcatgtaatcagtacagacgagaaccaagtatttgtcgccattcaagaatggaac
cagaatgatacgtacaacctttatatatctgacacccggggcgtcctttatacgttggcc
ttggagaatgtgaaaagcagcgtcgggccagaaggaaatattatgattgacctttatgag
gtagcaggcataaagggaatgttcttggctaacaagaagattgacaatcaagtgaagact
tttatcacatacaataaaggcagagactggcatttgctgcaagccccagagacggatctg
agagggaatactgttcactgcgtcctgccttactgctcgctccatttgcacctgaaggtc
tcggataatccttacacctctggaaacatcgctagcagagatactgctccaggcattata
gtggcgtcaggaaatataggctcagaactcaccgacagcgatatcagcatgtttatctca
tctgatgccggaaacacatggatccagatatttgaagaagagtacagtgttctgttcttg
gatcaaggtggtgtcctggtggctatgaaacatacatcacttcccattaggcatctatgg
ttaagttttgatgaaggaaggtcgtggaacaagtacagttttacatctagtccacttttt
gtcgacggtgtgttgggtgaaccgggagaagaaactcttataatgacagtttttggacac
ttcagccatcgttcagagtggcaactggtaaaagtggattataagtctatatttgacaga
cgatgtgttcatgaagattaccgtccatggcaactgcacaatcagggagaagcatgcatc
atgggtgccaagagaacatataaaaagcgcagatcagaaagaaagtgcatgcaaggaaaa
tacgcgggagccatgtcatcagagccctgtgtgtgcacagaagcagactttgagtgtgat
ttcggctatgagcgacacagcaatggccaatgtttggcagcattttggtataatccgtct
tcaccatcgaaggactgcagctttggacagagctatctaaatagcacgggatacaggaag
gtggtgtccaataactgcacagatggcgtgcgagaacagtacacagctaaacgtcagcag
tgccctggcaaggctccaaggggtctccgtatcatcacttccgatggcaaactgatagca
gaacaagggcacaatgtgacttttgtgctgcagctggaggagggtgatgttcaacggaca
aatatccaagtggattttggagatggaattgctgtttcgtatgctaatttcagctcaatg
gaggatggcgttaagcatgtttaccagaatgtggggatcttccgagtgatggtgcaagtg
gacaacaccttgggatcagagagtgctgtcctgtacttacatgtaacttgccccctggaa
cacgtccacttgtctcttccattcgtcacgaccaagaacaaagaggtgaacgcaacggtt
gtgctgtggcccagccaggttggcactctgacttacgtgtggtggcttgggaacaacacg
gagccgctgatcaccctggaggggagcatctcatttgcatttgcagcggagggaatgaac
accatcacagtacaggtctctgcagggaatgccattctgcaggacacaaagacaattgct
gtttatgaacaatttcaatcacttcgtttatcattttctccaaatttggatgactacaac
ccaaatatcccagagtggagacgtgacatcagtagagtgatccaaaaagctttggtggag
gcaacgggaatccacagcaaacacgtcctgatagcggttctccctggtctgccaacatcc
gcagagctcttcattttaccttttaaagacacggcagatgaaaagaaaagagcggcagat
gatctgaaacagatttctgaaaccttcatcagcaaactgaatcaagactttgtccagttt
gagctgaagcccggcattcagatcctggttcacgttgctcatttcactgcagctcccctt
gtggatctcgcacccagccacagcggttctgccatgctgatgctattgtccgtggtgttc
gttgggctggccgtcttcgtgatctataagttcaaaaggaagattccggggattaatgta
tatgcacagatgcaggatgaaaaagagcaagagatgatcagtccaggcagtcaaagtgaa
agcttgcccaatgtccctctaagtcagctgatgagccctgaacagctcttagatgagaag
ttggatacacgggccataggaagtatttccatagctgctgagaagcaaagcacaaccgag
atttgtaccacaacagagactcctaccacaacagagattcctacctatgtaaatgtttga
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