Geotrypetes seraphini (Gaboon caecilian): 117359961
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Entry
117359961 CDS
T09159
Symbol
FBXO40
Name
(RefSeq) F-box only protein 40 isoform X1
KO
K10315
F-box protein 40
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117359961 (FBXO40)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117359961 (FBXO40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
bHLH_NPAS4
Matrix_Filo
Motif
Other DBs
NCBI-GeneID:
117359961
NCBI-ProteinID:
XP_033799358
UniProt:
A0A6P8RC79
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Position
4:complement(106560646..106618761)
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AA seq
719 aa
AA seq
DB search
MQKTSGKCKRRIHKSPPGQHSHCEKCFNRYCQVSVQPAVSCIMINCRSHCGATFHLCKEE
EHQLLCPLEWVPCLNSEFGCPFSMSRIKLTKHLKVCPASVVCCSMEWNRWPNIDSKTPLY
KNIMKEPHSEEYLDISLAFRDQKILFSTLNMAQLFPELSEQSENIVPTSEMQALEGAVGG
TIAYGSGESIILGADGFDGTQLNETEEAELSQSELEVLAKNKESLDLDKYSTWEHIFSKE
YSASKHVDAISKVGQEVKNKSKEDEQLCITSHKSSSDIHQKIEALLIEEQNKTQPKEYLE
KKGLAPWQEGVLERLKNEVDIKDYNMYLVHHGKMLIHFGQMPACTPREKDFVYGNLEAQE
VKTVCTFKIPTSYRSKRGIAGEVLSKQRKEDKSVDTTDLRDLLEDLPKSDGIKTTLLCAM
ERELKGHVISEKKAIDGLFVDIGTQIYSFDFEPFPSHTVLADILFDRNPGLHLDLQSESV
TQRYNKSSSAFSFICNHFFRRDEFPSHFKNVHSDIQSCLDGWFQQRCPLSYLGCTFVQRR
FRPPDQKSKIIYSQQHDTFAVKPQLLPILYQGLKSNLSRKNKDSLTSLPLEILQHIAGFL
DSFSLSQLSQVSTLMRDVCGTLLHERGMVFLKWEKKRYSHGGTSWKARKKVWQFSSLFST
VSTWHFDNISSMSEHLKTCPYYAVEHRHDPVPLTSMLESCKQEKESLLTFRRRLGRKNV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaacttcaggaaaatgcaagagaagaatacataaatctcctcctggacaacac
agtcactgtgaaaaatgcttcaatcggtattgccaagtttcagtacagcctgctgtctca
tgtattatgatcaactgccgctcccattgtggtgccacttttcacttatgtaaagaagaa
gaacaccaactgctctgccccttggagtgggttccttgtctcaactcagaatttgggtgc
cctttttccatgtctcggattaagcttacaaagcacctgaaagtttgcccagccagtgta
gtctgctgttctatggaatggaaccgttggcctaatatagattccaaaacacctttatat
aaaaatatcatgaaagagccacacagtgaagaatatcttgacatatctttagccttcaga
gaccagaagattctctttagcactctcaacatggctcagctctttccagaactgtctgaa
caaagtgaaaatattgtgccaactagtgaaatgcaagcccttgaaggtgctgttggtgga
accatagcttatggctctggagaaagtattatactaggtgctgatgggtttgatggtaca
cagctgaatgagactgaagaggctgagcttagccaatctgagcttgaggttttagcaaag
aacaaggaatcattggatctggacaaatattcaacatgggaacacatttttagcaaagaa
tattcagcatccaaacatgtagatgctatttcaaaagtaggacaagaagttaaaaataaa
agcaaggaagatgaacagctttgtataacaagccataaaagcagcagtgacatccatcag
aagatagaagctctactcatagaagagcaaaataaaacccaaccaaaagaatatttggaa
aagaaaggtcttgcaccttggcaagaaggggtattggaaaggctgaaaaacgaagttgac
attaaagattataacatgtacctagtgcatcatgggaaaatgttaattcattttggccag
atgcctgcttgcacacctagggaaaaagactttgtttatggtaaccttgaagcacaagag
gtgaaaactgtctgcacattcaaaattcccacaagttaccgtagcaagagaggaatagct
ggagaggtcctatcaaaacagagaaaggaagataagtcagtagataccacagatttaaga
gatctccttgaagatcttccaaaatcagatggcatcaaaacaaccttgctgtgtgcaatg
gaaagggaacttaaaggtcatgtgatatctgagaagaaggctattgatggcctctttgtt
gacattgggacccagatttatagctttgattttgagccatttccttcacacactgttcta
gcagatattttgtttgataggaacccaggactccatttagatcttcaaagtgagagtgtt
acacagaggtataacaaaagtagctctgctttcagcttcatttgtaaccacttttttagg
agggatgaattcccatcccacttcaagaatgtccattctgatatccagtcttgtttagat
ggctggttccagcagcgctgcccactttcctacttaggatgtacatttgttcaaagacga
ttccgtccaccagatcaaaaatcaaagatcatctacagtcagcagcatgacacctttgcc
gttaagccacaacttctacctatactttaccaaggtttgaagtccaacctttccaggaag
aacaaagactctttgaccagccttcctctcgaaattctgcaacacattgctggatttttg
gacagcttcagtttgtcacagctgtctcaagtgtctactctgatgagagatgtctgtggc
acattattacatgaaaggggtatggtctttctgaaatgggagaaaaaaagatattctcat
ggaggcacatcatggaaagctcgtaaaaaggtctggcagttcagtagtcttttctccaca
gttagcacctggcactttgataacatctcatccatgtctgagcatctgaaaacatgcccg
tactatgctgtggaacatagacatgaccctgttccactgactagcatgcttgagtcatgt
aagcaagaaaaagaaagccttctcaccttcagacgtagacttggaagaaaaaatgtttga
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