Geotrypetes seraphini (Gaboon caecilian): 117360400
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Entry
117360400 CDS
T09159
Symbol
TSPEAR
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gsh03037
]
117360400 (TSPEAR)
04990 Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
117360400 (TSPEAR)
Cilium and associated proteins [BR:
gsh03037
]
Other cilia and associated proteins
Stereociliary proteins
117360400 (TSPEAR)
Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
117360400 (TSPEAR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
Laminin_G_3
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
117360400
NCBI-ProteinID:
XP_033800001
UniProt:
A0A6P8RFB9
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All DBs
Position
5:complement(158803756..158941075)
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AA seq
701 aa
AA seq
DB search
MAALVFKPNAENLQPIKTLMMSSTGFPFSKLESSEIHIDIAQYDPAAYLTLMFNFSATDL
RPLDILSEGVPSSGVQPGIRMVQVQGSRGFLFSTSVGPPSFPSSQLFINCGLFPEEFSIV
VTLKVTSIPPKKNEYIFTLIEEKSDNVLVGLRYSMNKLHFLFWSKDVFNGWQSRVTFRGI
TLADNRWHTLIMAVSGQSFSLTIDCNMSLDVVVSAPFPASLNTYGSRFYIGSRKRLKGAF
SGLLRQLVLLPGSDATPRICPSSNPKLAVLSIPTVLQELPVKPESNEVLVTYPYEADMKV
NLGVRPPCTKAENAQFWFDASRRGLYLCDGLQWISMLEAKKRLDYVEEYQNLITTSETMG
LETFVIPKVGLFMATANRKTQPGSAIYKWTDGKFEPYQYITTYQAQAWRYFTIGKKIFLA
VANFEQNENSQELSVIYKWNPKKQKFFVYQRIATHSARDWESFQIGGEAFLVVANHRQGD
NHNINSIIYKWNSRTALFEINQTIPTSGAYDWEFFTIGPYSFLVVANTFNGTSTKIHSHI
YIWLSGMFRLFQSILTFGAADWEVFHIGDRIFLAVANSHSYDPRTLLHNSYSINSTIYEL
NITAQMFVKFQDILTFSALDWEFFSVGEDSFLVVANSFDGVSFSVNSVIYRWQGYEGFVA
VHSLPTFGCRDWEAFNTTAGSYLIYSSAKEPISKVLKLKTY
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctcgtatttaaaccaaacgctgaaaacttacagccaatcaaaacactgatg
atgtcaagtactggctttccattttctaaacttgaaagttcagaaattcacatagacatt
gctcagtatgatccagctgcatatttgactttaatgtttaatttctctgctacagatctt
cggcccttggatatcttgtcagagggagttccttctagtggcgtacagcctgggatacga
atggtccaggttcaggggtctcgtggatttcttttctccacatctgtcggcccacccagt
ttcccatcatctcagcttttcattaactgtggtctctttccggaagaattttccattgtc
gttaccttgaaagttaccagcattccacctaagaaaaatgaatacatctttacactaatt
gaagagaagagtgacaacgtgttagtgggactcagatactcaatgaataaacttcacttc
ctgttctggagcaaagatgtttttaatggctggcagtctcgtgtgacctttcgaggcatt
actttagcagacaaccgatggcacacactcatcatggctgtgtctgggcaatccttttcg
ctaaccattgattgcaacatgtccctggatgtggttgtgagtgcacctttccccgcatcc
ttgaacacttatggatccagattttacattggaagcaggaagagactgaaaggtgctttc
tctggattgctaagacagcttgtcctattaccaggatctgatgccaccccaagaatatgc
ccaagcagcaatcccaaactagctgtgctttccattcccacagtcctacaggaactccca
gtcaagccagagagcaacgaggtgcttgtgacatatccttatgaagctgacatgaaggtt
aatttgggagtacgccctccttgcacaaaggcagaaaatgctcaattctggtttgatgct
tccaggaggggactttatttatgtgatggtctgcaatggatctcaatgttagaagctaaa
aagagactggactatgtagaagaatatcagaatctaattactacctcagaaacgatgggt
ctagagacttttgtaatcccaaaggttggactttttatggcaacagccaacagaaaaact
cagccaggttcagctatttataaatggactgatggaaaatttgagccctaccaatatatt
accacatatcaagcacaagcctggagatatttcacaataggaaaaaagatcttcctagca
gtggctaattttgaacagaatgaaaacagtcaggagttgtctgtgatttacaagtggaac
cccaagaagcagaaattttttgtttaccagaggatcgccacacacagcgctagggactgg
gagtcatttcagatagggggagaggcgttcctcgtcgttgccaaccacagacaaggtgac
aatcacaatataaatagtatcatttacaaatggaactcaagaactgcactttttgagatt
aaccagaccattcctacctcaggggcttatgactgggagtttttcactattggaccttat
tcattcctggttgtggcaaacacctttaatggtacatccacaaagatacattctcatatc
tacatctggctcagcggaatgttccgactcttccagtcgattctgacatttggggctgct
gactgggaagtgttccatattggagaccgaatttttcttgctgttgccaacagtcacagt
tacgaccctaggactttgttgcacaactcctattctatcaattcaaccatctatgaattg
aatatcacagcccagatgtttgtcaagttccaggatatcctcaccttcagtgctttggac
tgggaattcttttctgtgggtgaagacagcttcctggttgtggcaaactcctttgatggc
gtctccttttctgtgaacagcgttatatacaggtggcaaggatatgaaggttttgtagcg
gttcacagtctgccaacatttggatgtagagactgggaagcttttaatactacagcagga
tcttacctcatctactcaagtgcaaaggagcccatatccaaggtgctgaaacttaaaacc
tattga
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