Geotrypetes seraphini (Gaboon caecilian): 117360436
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Entry
117360436 CDS
T09159
Name
(RefSeq) small nuclear ribonucleoprotein F-like
KO
K11098
small nuclear ribonucleoprotein F
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117360436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117360436
03041 Spliceosome [BR:
gsh03041
]
117360436
03032 DNA replication proteins [BR:
gsh03032
]
117360436
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
117360436
Spliceosome [BR:
gsh03041
]
Complex A
U1 snRNP components
Sm proteins
117360436
U2 snRNP components
117360436
Complex B
U1 snRNP components
117360436
U4/U6.U5 tri-snRNP components
117360436
Complex C
U2 snRNP components
117360436
DNA replication proteins [BR:
gsh03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
117360436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117360436
NCBI-ProteinID:
XP_033800065
UniProt:
A0A6P8QW63
LinkDB
All DBs
Position
5:complement(227327254..227327518)
Genome browser
AA seq
84 aa
AA seq
DB search
MSLPLNPNPFLNGLTGKPVMVKLQWGMEYKGNLVSVDGYMNMQLANTEEYIDGALSGHLG
EVLIRCNNVLYIQGVEEEKDGEMR
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaccgttaaaccctaatcctttcctcaatggactgactggtaaaccagtaatg
gtcaagttgcagtggggtatggagtataaaggcaatttggtgtctgtagatgggtacatg
aacatgcagcttgcaaacacagaagaatacatagatggagcattgtctggacatcttggt
gaagttttgataagatgcaacaatgttctgtatattcaaggtgtagaggaggagaaggat
ggagaaatgagataa
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