Geotrypetes seraphini (Gaboon caecilian): 117360439
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Entry
117360439 CDS
T09159
Name
(RefSeq) DNA excision repair protein ERCC-6-like isoform X1
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117360439
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
117360439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_34
TPR_11
TPR_2
DEAD_2
TPR_1
TPR_8
Mak16
Motif
Other DBs
NCBI-GeneID:
117360439
NCBI-ProteinID:
XP_033800075
UniProt:
A0A6P8QW74
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All DBs
Position
5:85573295..85605885
Genome browser
AA seq
1323 aa
AA seq
DB search
MDIDSRERIGSIDLSFSGIDANQAAKYGRPKYLPSSRRTLQEIILPNYVKKAKEEARNGN
LTQSLELFRLANEICSSEKVKSRIKKLEEVLAELDLQEEQEDEFVNVLDSDLMIYKDLYN
KLYKYQKEGVAFLYSLYKCGYKGGILADDMGLGKTIQIIAFLSCMFDAESIKYVLLVMPT
TLISNWKKEFAKWTPGMRVHEFHGTSKSERTKNLEKIQRKGGIIITTYQMLINNWQQLSS
FNGREFVWDYIILDEAHKIKTSSAKTTKCAHSIPVKNRILLTGTPVQNNLREMWSLFDFA
CQGTLLGTSKTFKMEYENPITRAREKDATPGEKALGLKISENLMKIIKPYFLRRRKEEVL
NNKSTEMEPNDHSDSNQKFISAPIPSLSRKNDFIVWVCLGSVQEEIYRKFLSLDEIKELL
MSTRSPLAQLNVLKKLCDHPRLLTARACIQLGLEGHEQSISYNESEENDYVGALKIDHIS
DETLIQESGKLVFLMELLVRLRDEGHQTLVFSQSRKMLDILYRILSNKGFKIMRIDGTVS
QIAERERRINMFQNSKDYSVFLLTTQVGGVGLTLTAADRVVIFDPSWNPATDAQAVDRVY
RIGQKENVVIYRLITCGTVEEKIYRRQIFKDSLIRQTTGDKKNPFRYFTKQELRELFSLD
DTQTSSTQIQLQSMHAHQRRTDTNLDEHIAYLYTLGMFGISDHDLMYTAEAESHEEHDVN
GEDHHYIQQRVQKAQNLVQLESQMNEQLMEQMKSGTEGAWLRQAAVSSQQVFASKPNQKK
LPNSEFNPNTQHVSPPVIVDLTQNISDVSCQMTSLVIEESDEEMMTENLSDLDKNVLQKS
ECSETDKHSRFIPSSTYPLAHDDKNGTEAHPVNAKGDGSLTSGLLSCQLVENSTPNINNK
QMTSVHLPCDYSTVTELEPIISDQLVDSSMFCNVPVPSNNLKTTNTSRTAGECETSQSAS
SRKLSQSLFKVTGNLRSDLTEATLEDKISLESSFLKSSSLFQSDFNLILEDTVEHTNNSE
AHLKAENHLCKSTENSCVKENYGSSHPGESDGEYSEESNLASYDEELKDEDQFFSVKKKN
IRRIVSDDENESKSLSTWEENIHEKGFSPEVSPLCKSLRGISASTPKNSSLANSLFSPSR
STGANRSTASKRSLVNIVVEDMDDVEEILERKSTSTDDTEEMEDCVTKEAEEQSLGEALP
LEGTEPCYLDEEESEESVVESSNETEDFLDKSTSDYELESGEQMDCFAQKKDLKDLCKNE
VIESNGLSNSNYYETLVKQGKELTQCGKLKEALNCLQQALDIKSGDHEVMLLMLNLYRQL
SQS
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atggacattgacagccgcgaacgtataggatccatcgacctctccttctctggaatcgac
gcgaaccaagcagcgaaatacggaaggcctaagtatcttccatctagcagacggactctg
caggagatcattctgcctaattatgtcaagaaagcaaaagaagaagccagaaatggaaat
ctgacacagtcacttgaattattcagactggcaaatgaaatttgttcaagtgaaaaggtg
aaaagcagaattaagaaactagaagaagtcctagcagagctagatcttcaagaagagcag
gaagatgaatttgttaatgttttggacagtgatttaatgatttacaaagacctatacaat
aaactttataagtatcagaaagaaggagtggctttcctatacagtctctataagtgtggc
tataaaggaggcattctagcagatgatatgggtttgggaaaaactatacaaattattgca
tttctctcttgcatgtttgatgctgaaagtataaaatatgtactgctggtcatgccaaca
acactcatcagcaactggaaaaaggaatttgccaaatggactccaggaatgagggtgcat
gaatttcatggcactagtaaaagtgagcgtactaaaaacttggaaaaaattcaaagaaag
ggtggtattattattacaacatatcagatgttgataaataactggcaacaactttctagc
tttaatggaagagagtttgtttgggattacataattctggatgaagctcacaaaattaaa
acctcttctgctaaaacaactaaatgtgcacattctattcctgtaaagaatcgaatcctt
cttacaggaacacctgtccaaaacaacctgagggagatgtggtccctgtttgactttgca
tgccagggaactctgcttggaacatcaaaaacatttaaaatggaatatgaaaatccaatc
acaagagcaagggagaaggatgctaccccaggtgagaaagccctggggttaaagatatca
gaaaatcttatgaaaattattaaaccgtactttctcagacgaaggaaggaggaagttctc
aataataagtccactgaaatggaacctaatgatcacagtgacagcaatcaaaagtttatt
agtgctcctataccatctctttcaaggaaaaatgatttcatcgtatgggtgtgtcttgga
tcagtacaagaagaaatatacagaaagtttctttctttggatgaaattaaagaattgttg
atgagcacacgatcacccctagctcagctgaatgttttgaaaaagttatgtgatcatccc
agattattgacagcaagagcttgtatccagcttggtcttgaaggacatgaacaatccata
tcatacaatgaaagtgaagagaatgattatgtaggagctctaaagattgaccatatttct
gatgaaactctgattcaagaatctggaaagctggtattcctaatggaacttctagtaaga
cttagagacgagggccatcaaactcttgtattctctcagtcaagaaaaatgttagacatt
ctttatcgtatcttgtctaataaaggttttaagatcatgcgaattgatggaacagtatct
caaattgctgagcgagaaagaagaattaatatgtttcagaatagtaaagattattctgtg
tttttgcttaccacacaagtaggaggagtaggcctgactttgactgcagctgacagagta
gtaatctttgatccaagctggaatcctgctactgatgctcaagctgtagatcgagtttac
aggattgggcaaaaagaaaatgttgtgatatatcggttgattacttgtgggactgtagaa
gaaaagatatataggcgacagatttttaaagactcattaataagacaaacaactggtgac
aaaaagaacccattcagatatttcactaaacaagagctaagggaacttttttctttggat
gatactcaaacctcctcaactcagattcaacttcagagcatgcatgcacatcaaagaaga
acagatacaaatctggatgaacatattgcttatctttatacattggggatgtttggcata
tctgatcatgacctcatgtacacagctgaagcagaatctcatgaagagcatgatgtgaat
ggagaagatcatcattatattcagcagagggttcaaaaagcccaaaatcttgttcagtta
gaatctcagatgaatgaacaactaatggaacaaatgaaaagtggaacagaaggtgcctgg
ttgagacaagcagctgtttcttcccaacaagtatttgcttccaaaccaaaccaaaagaaa
ctacctaacagtgaatttaaccccaacacacagcatgtttcaccacctgtcattgttgat
cttacacagaatatttcagatgtcagctgccaaatgacaagtctagttattgaagaatca
gatgaagaaatgatgacagaaaacctttctgacttagataaaaatgtattacagaagtca
gagtgcagtgaaactgacaagcactcaaggtttataccttcttctacatatcccttggct
catgatgataaaaatggaactgaagctcatcctgttaatgctaagggtgatggctctctt
acatctgggcttttgtcatgccagttagtagaaaattcaacaccgaatattaataataag
cagatgacttctgtccatttgccttgtgactactctactgtaactgaacttgagccaatt
ataagtgatcagcttgtggacagttccatgttttgtaatgttcctgtaccatccaacaat
ttgaagaccacaaatacaagcagaactgctggtgagtgtgaaacttcacaatctgcctca
agcagaaaattatcacaaagcttatttaaagtcactggaaaccttagatctgatctgact
gaggccactctggaagacaagatcagcctggagagtagctttctcaaatctagctctcta
tttcagtccgacttcaaccttattttggaagatacagtggaacacacaaacaatagtgaa
gctcatcttaaagcagaaaatcatttatgtaaatctacagagaattcttgtgtaaaagaa
aattatgggagttctcatcctggagaaagtgatggtgaatattcagaggaatctaatctt
gcttcatatgatgaagaactgaaagatgaagatcaatttttttcagttaaaaagaaaaat
attaggagaattgtttcagatgatgaaaatgaaagcaagtctttatccacatgggaggaa
aatatacatgaaaagggattttctcctgaagtcagtcctttatgtaaatcactaagaggc
atcagtgcttctactccaaaaaatagttctctagcaaatagtctcttttcaccttcgaga
agcacaggtgcaaacagatctacagcctcaaaacgatctctggtcaatatagttgtagag
gatatggatgatgtggaagaaatcttagaaagaaaaagtacaagtactgatgatacagag
gaaatggaagattgtgttacaaaggaagcagaagaacagtcacttggagaagctcttcca
ttagaaggtactgaaccctgttatttggatgaagaagaatctgaggaatctgtggtcgag
agctccaatgagacagaagattttcttgacaaatccacttctgactatgaactagagtct
ggagaacaaatggattgctttgctcagaaaaaagacctaaaagacctatgcaagaacgaa
gtaattgaaagcaatgggctgagtaattcaaactattatgaaactttggtaaaacaaggg
aaagaattgactcagtgtggcaaactgaaagaagctttgaattgtttgcagcaagctctt
gatatcaaaagtggtgatcatgaagttatgctgttgatgttgaatttgtacaggcaactc
tcgcaaagttaa
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