Geotrypetes seraphini (Gaboon caecilian): 117360517
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Entry
117360517 CDS
T09159
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117360517 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gsh04812
]
117360517 (CLASP1)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117360517 (CLASP1)
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
117360517 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
HEAT
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EZ
TOR1L1_N
HEAT_2
Sec7-like_HUS
Cnd1
HEAT_DAAF5
ParcG
MMS19_C
RTP1_C1
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
117360517
NCBI-ProteinID:
XP_033800270
UniProt:
A0A6P8QWS6
LinkDB
All DBs
Position
5:251326646..251832915
Genome browser
AA seq
1563 aa
AA seq
DB search
MEPGMDHWLTQIQQKDVGKRLQIGQELIDYMLDKQKSPDLDHDQTILDKMVDGLATSWVN
SSNFKVALLGMDILSALVSRLQDHFKSQIGTVLPSLLDRLGDSKDSVREQDQILLLKIME
LSAPPQYVWDRMLGGFKHKNFRTREGVCLCLIATLNIHGAHSLTLSKIVPHICNLLGDPN
SQVRDAAMNSLVDIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGTMIQSSSDKN
FDDEDSVDGNRPSSASSSTSSKAPSSSRKGVNMGTARRPGTTTPGTKLAGSAKEGAGAVD
EEDFVKAFVDVPTVQIYSSRDLEESINKIREILSDDKHDWEQRITALKKIRSLLVAGAAE
HDSFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTLFNLV
PNSAKIMATSGVVTIRLIIRHTHFPRLIPIITSNCTSKSVAVRRRCYEFLELLLLEWQTF
SLERHISILAETIKKGIHDADSEARIEARKCYWGFHSHFSKEAEHLYHNLESSYQKALQS
HLKNSDSIISLPQSDRSSSSSQESLNRPLSAKRSPTGSTASRASTVSAKSLPTSGTLQRS
RSDIDVNAAANAKSKAAGSPASVPFSSAAALPPGSYASLGRVRTRRQSSGSATNVTSSPV
DTRGRSRAKVVSQSQPGSRSSSPGKLLGSAYGGLPSGAQRVPLVAQSSEKRSKIPRSQGC
SRETSPNRIGLDRFGLGQSGRIPGSVNAMRVLSTSTDLETAVADALLLGDPRSKKKPARR
RYEPYGMYSDDDANSDASSACSERSYGSRNGSIPHYLRQTEDVAEVLNHCASSNWSERKE
GLIGLQNLLKSQRTLRLHFPFLPLTAFSQLQTSDLTSILTCRVELKRLCEIFTRMFADPH
SKRVFSMFLETLVDFIIIHKEDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDS
FPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIIT
WTTEPKSSDVRKTLQNWVCDDLPARPTTTSSGPGEGNLEEKCKQAAQIVLISLFELNTPE
FTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTVGRTPSRHSSSRTSPLTSPTNC
SHGGLSPSRYWGWSADGLSKHPPPFSQSHSIPNAPSHKTFRRSYSPSMLDFDTENLNSDE
IYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDPVSRDGGIAAPATDIRGGSDIVEG
GGRMALDNKTSLLNTQPPRPFSGPRAREYNPFPYTDTISAYDKTALKEAVFDDDMDQLRE
GSIDHSDLVADLLKELSNHNERVEERKSALCELLKITREDNLGVWDEHFKTILLLLLETL
GDKDYSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLA
SSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERISKESLHQLLPDIIPGLLQGYDN
TESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTINSNSSSSSDVS
THS
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggagcctggcatggatcactggttaacacagatacagcagaaagatgttggaaaacgg
cttcagattggccaagagcttatagattatatgttggataaacagaagtctccagatctt
gatcatgaccagacaatactggacaaaatggtagatgggcttgctacctcttgggtaaac
tctagcaattttaaggtggctttgttaggaatggatatactgtctgccttagtatcacgt
ttacaagatcattttaaatctcagattggtacagtactaccaagcctacttgatagattg
ggagattcaaaggattcagtgcgagagcaagatcagattctgctgctaaaaattatggaa
ctttctgcgccacctcagtatgtgtgggatagaatgctaggaggattcaaacacaagaat
ttccgaacaagagaaggagtctgcctctgtctcatagcaactctcaatatacacggtgcc
catagtctaacactaagcaagattgtgcctcatatatgtaacctacttggagacccaaat
agccaggttcgagatgcagcaatgaacagtttagtggacatctacagacatgttggtgaa
cgagtacgagcagacctcagtaagaaaggattaccgcagtcaaggctaaatgtaatcttt
acaaagtttgatgaagtccagaaatctggaaccatgatccagtcttcatctgataaaaat
tttgatgatgaagactctgtggatgggaacagaccttcatcagcaagctcatccacatct
tctaaggccccctcaagctcccgaaaaggtgtcaacatggggactgcacggagaccagga
actacaacacctggaacaaagttggcaggaagtgcaaaagaaggagctggtgctgttgat
gaggaagacttcgttaaggcatttgttgatgtcccaactgttcagatttattccagtcga
gatctagaagaatccatcaataaaattagggaaattttatctgatgataaacatgattgg
gagcaaagaataactgctctgaagaaaattcgttctctattggtggctggagctgctgag
cacgactccttctttcaacatcttcgcctgctggatggagcatttaagctgtctgctaaa
gacttacgttctcaggtggtgcgagaggcgtgtattactttagggcatctctcatctgtc
ttgggaaataaatttgatcatggtgccgaagccattatgccaactctgttcaatctagtc
cctaatagtgccaaaatcatggccacatctggtgttgtaaccattaggttaattattcga
catacgcacttccccaggctaatacccatcataactagtaactgtacctcaaagtctgtt
gcggttagaaggcgctgttatgaatttttagagttgctattgctggaatggcagacattc
tccttggaaaggcacatatcaatattggctgaaacgataaagaagggcattcatgatgca
gattctgaagccagaatagaagccagaaagtgttactggggctttcacagccactttagc
aaagaagcagaacacttgtatcataacttggaatcatcctatcaaaaagctctgcaatca
catctgaagaattcggacagcataatatctctacctcagtcagatcgttcctcctccagc
tctcaggaaagcttgaaccgtccactttcggctaaaagaagtccaactggaagcactgca
tccagagcttctaccgttagtgcaaagtccttgccaacctcaggcactctgcagcgatca
cgcagtgatatagatgtgaatgcagctgccaatgccaagtcaaaagcagcaggttctcca
gcttctgtccccttcagttctgctgcagccttacctccaggatcttatgcttcactaggt
cgtgttcgcacaagacggcagagctctggaagtgctaccaatgtgacctcatctcctgtt
gatacccggggtcgcagtagagcgaaagtggtttcacaatcccaacctggcagtcgatcc
agttcacctggcaagcttctgggaagcgcatatggaggattgccaagcggggctcagcga
gttcctttggtggcacaatcctcagaaaaacgcagcaagattccccgcagtcaaggatgc
agtcgtgagacgagcccaaacagaataggacttgaccgctttgggctggggcagtctggc
agaattcctggctctgtgaatgccatgagggtcctcagtacaagcacagacttggaaact
gctgttgctgatgcactgctcttaggagaccccagaagcaagaagaagccagcgaggagg
agatatgaaccgtatggaatgtactctgatgacgatgccaacagtgatgcgtcaagtgcc
tgctcagaacggtcctacggttccagaaatgggagcatcccacattacttgcggcagacc
gaagatgtagcagaagttctgaatcactgtgccagttcaaactggtctgagcgcaaagaa
ggacttataggtcttcagaatttgttgaagagccaaaggacactcaggttgcatttccct
ttccttcctttgactgctttctcacaactccaaacatcagacttaacctctatcttaact
tgtcgagttgaattgaaaaggctttgtgaaatcttcacccggatgtttgcagacccccac
agcaagagagtgtttagtatgttcctggaaactctggttgactttatcataatacacaag
gaagatttgcaagattggctctttgtgttactcactcagttgctgaagaagatgggagca
gacttgttgggctctgtacaagcaaaagtacaaaaggctttggatgtgactagggattca
tttccatttgaccaacagtttaacattctcatgagatttattgtggatcagacacaaacg
ccaaatctaaaggtaaaagttgcaattctgaagtacatagaatctctagccagacagatg
gacccaacggactttgtaaactccagtgaaaccagacttgctgtttctcgaataataaca
tggacaacagaaccaaagagctccgatgtgagaaagactctgcaaaattgggtatgtgat
gatttaccagccaggcccactacaacctcttcagggcctggtgaaggaaatctggaggaa
aaatgtaaacaggcagcacagatagtcctgatttcattgtttgaactgaacacgcctgag
tttaccatgctacttggtgccttgccaaaaacattccaggacggtgcaactaaactccta
cataaccacctcaagaactccagcaacaccagtgtgggatcacctagcaatacagttggt
cgaactccctcccgacactctagcagcagaaccagccctttaacatcccctaccaactgc
tcccatggtgggctgtctccaagtcggtactggggttggagtgcagatgggctgtcgaag
cacccccctcctttttctcagtctcactccatccccaacgctccttcccacaagactttc
agacgctcttactctcccagcatgctggatttcgatacagagaacctgaattcagatgaa
atctacagctctcttcgtggagtcacagaggccattgagaagtttagttttcgtagtcaa
gaagatctcaatgaaccaattaagcgtgatggcaagaaggattgcgatcctgtttcgcga
gatggtgggattgctgcacctgcaactgatattcgtggtgggagtgacattgtggaagga
ggagggagaatggctttagataataagacatcattgttgaacacccagccgccacgtcct
ttctcagggccacgagcacgcgagtacaatccctttccgtatacagacacaatcagtgcg
tacgataagactgccctcaaggaagctgtgttcgatgatgacatggatcagcttcgggaa
ggttctattgaccattctgatctggtagctgaccttttgaaggaattgtcgaatcacaat
gagcgtgttgaagaaaggaaatctgccctctgtgaattgcttaagatcacaagggaagat
aacctgggagtttgggatgaacacttcaaaaccattttgcttttgctgctggaaacactg
ggtgacaaggattattcaatcagagctctggcattgcgggtactacgggaaattctgagg
aaccaaccagcgaggtttaaaaattatgctgagctgactatcatgaaaactctggaagct
cataaagattctcacaaagaggttgttagagcagctgaggaagcagcttccactttggcc
agttccatccaccctgagcagtgcatcaaagtcctgtgcccaatcattcagacagcagat
tatcctattaacctagctgctatcaaaatgcagacgaaagttattgagcggatttccaaa
gaatccttacatcagctccttcctgatatcatccctggattattacaggggtatgataac
acagaaagcagtgttcgtaaagctagtgtgttttgcctggtagcaatttattcagtgatt
ggagaagaactgaagcctcaccttgcacaacttacagggagcaagatgaagttactcaac
ctgtacattaagagggcccaaacaatcaatagcaacagcagttcgtcatcagatgtttca
actcacagctag
DBGET
integrated database retrieval system
