Geotrypetes seraphini (Gaboon caecilian): 117360814
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Entry
117360814 CDS
T09159
Symbol
DTX3L
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117360814 (DTX3L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117360814 (DTX3L)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117360814 (DTX3L)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117360814 (DTX3L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
KH_DTX3L
RRM_PARP14_1
DTX3L_a-b
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-C3HC4_3
DUF4283
zf-RING_6
NID
Siva
RRM_PARP14_3
zf-RING_10
zf-C3HC4_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
117360814
NCBI-ProteinID:
XP_033801135
UniProt:
A0A6P8QZA3
LinkDB
All DBs
Position
5:244616196..244660661
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AA seq
721 aa
AA seq
DB search
MGDGGYPYPLLLRGDWGDLTPRKLKNKLLCYFQSLKKSSGGDCEIAELSRQHAVIRFAGE
EACKRVLSKKDHFLLVGNSAVTISASPYDELKSMNLDESSEASEMEEASERQLQNYQNSV
DALSQKIFLHITARLNTSLFSKDQREQIKTLFPSIKILKAPDDLGIQEISGDFTEIDKVH
QHLEKLHMGKREGASLSERRNSLPSKETGNEINVDMALYEYVMHVCQKEIEELKEKCNVC
FRESISGDCLIVRIVSLDGKNNTGIYKAQQRFIHIYQKKTENLAQNKVPLLGSASQTHEI
VQTLNAKFTSLFAKVEQNELILHGPRNELLEAQTYLEKMNDKESWHVKPVMITQRNYSWE
KGVEIDASQISVLETLLAGEIKAIERKYDSDLVKETDIFNKKVTIRFKPKNKDSELYLCA
YESFIRAFQKIMSSLVKKSFPLQSAEQNQKMTLFHWLQKENQNVEYRYSNDILTLIGLPN
VVAQVAHSLNEGVREQAAGIHSQATTTTNDTPVPMEIDEADGFTLISKPKSEAATGENKE
NTCPICLDKLEEKTMLSKCKHEFCKECINKAMEHKPVCPICNTCYGTIKGNQPDGTMSHV
TISTRLPGYSCDTININYTFPGGIQADNHPNPGKPFSATTRMAYLPNNKEGKQILKLLEK
AFDQKLIFTVGQSRTSGANDVITWNDIHHKTNFYGGPSGFGYPDPDYLKRVREELKAKGI
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgggagatggcggctacccgtacccgctcctgcttaggggggactggggcgacctcacc
cccagaaagctgaagaacaagctcctctgttacttccagagccttaagaaatcgagcggg
ggagactgcgagatcgctgagctgagccggcagcacgccgtgatccgcttcgctggagag
gaagcttgcaagcgtgtgctatccaaaaaagaccactttctgcttgtcggaaattcagcc
gtgacaatttctgccagtccttatgatgaattgaagtccatgaatcttgacgaaagcagt
gaagcttctgaaatggaggaggcatctgaaagacagttacagaactatcagaactcagtg
gatgccttgtcccaaaagatttttctgcacataactgcacgtctgaatacaagtctattt
tctaaagaccaaagagagcaaataaaaactctgtttcccagcataaaaatattgaaggca
cctgatgaccttggcattcaagaaataagtggagactttactgaaatagacaaagtgcac
caacacctggaaaagctgcatatgggaaagagagagggtgcctcactttcagaaaggagg
aacagcttaccctctaaggaaacaggaaatgaaataaatgttgacatggccctctatgag
tatgtcatgcatgtttgccagaaggagattgaagaattaaaagagaaatgtaatgtatgt
ttcagagagtccatttcaggtgattgtttaattgtccgcattgtatctctggatggcaag
aataataccggtatatacaaagcccaacagcggtttattcatatttaccaaaaaaaaaca
gaaaatcttgctcaaaataaagtccctttattgggtagtgcaagtcagacacatgaaata
gtacagaccttaaatgcaaagtttacaagcttgtttgcaaaagtagaacaaaatgaacta
attcttcacggtccaaggaatgagctcctggaagcccaaacttatctggaaaagatgaat
gacaaggagagctggcatgtaaagcctgtcatgatcacccagagaaattactcctgggag
aaaggagttgaaattgacgcttctcagatatcggtactggaaactctgctcgctggggaa
attaaagcaatagaacgcaaatatgattctgaccttgtgaaagaaactgacatctttaat
aagaaagtgaccatccgattcaagcccaagaacaaagattctgagctttacctctgtgct
tatgaaagcttcatccgtgcctttcaaaagatcatgtctagtcttgttaaaaagagcttt
cctctacagtctgccgagcagaatcagaagatgacactctttcactggttgcagaaagaa
aaccagaatgtggaatatcgctatagcaatgacatactgactctgattgggttaccaaat
gttgtggcccaagttgctcactctctgaatgagggtgtgcgagagcaagctgccggcatc
cattcccaggccacaaccactacaaatgacacaccagtacctatggaaatagacgaggca
gatggttttactctgatttcaaagcctaaatcagaagcggcaacaggcgagaacaaagaa
aacacttgtccaatttgcttagataaactcgaggagaaaaccatgctgtccaagtgtaag
catgagttctgtaaagagtgtatcaataaagccatggaacataagcccgtatgtcctata
tgcaatacatgttatggcaccatcaagggaaatcaaccagatggaaccatgtctcatgtc
actatttcaacacgacttcctggttacagttgtgatactataaatattaattatactttc
ccgggtggcattcaagcagacaaccatccaaacccagggaaaccattttctgcaacgact
cgaatggcatatttacctaacaataaagaaggaaaacaaattctgaagctgcttgaaaaa
gcctttgatcagaaattgatttttacagtggggcaatcccgtacttctggcgccaacgat
gttatcacctggaatgatattcaccacaaaaccaacttttatggggggccatcggggttc
ggataccctgatcccgactacctgaagcgtgtccgagaagagctgaaagcaaaaggaatt
gagtaa
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