Geotrypetes seraphini (Gaboon caecilian): 117360879
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Entry
117360879 CDS
T09159
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117360879 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117360879 (FIP1L1)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117360879 (FIP1L1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
117360879
NCBI-ProteinID:
XP_033801330
UniProt:
A0A6P8QZS7
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Position
1:complement(212490296..212832571)
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AA seq
564 aa
AA seq
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MSTEETPEKMTTGGDEEEEWLYGDENEPEKPEEEEEETVSSLPPPVTEEETTENGVTKTK
VTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLNIKTGGRIYGASGPKVK
GVDLDAPGSINGVPLIEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKKLRT
GLEALPVASTTNKITVQQGRTGNSEKEPTVQSSKPDFTSPTNVFKSGVPPPRTPLVEGAF
PSPPDHRDVLLYQSRKISGTIDVIGQTTTITRVEGRRRGANENSNIQVLSEQSPSEVDNN
FIKPPPPFFPPGAPPTHLPPPPFLPPPPSVSSAPPLIPPPGIPITVPPPGFPPPPSLIPT
IESGHSSAYDSRSAPTFPYGNVSFPHLPGSASPWPSLVDTSKQWDYYSRREKERERERER
DRERDRDRERERERERTRERERERERDREHSPSASIYNRVAGGQLKSDDDRYRYREYAER
GYERHRERISREKEERHRERRHREKEESSRHKSSRSSSRRRHDSEEGDSHRRHKHKKSKR
NKEGKETGSEPAPDQENTEAASVE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgaggagacaccggagaagatgacgaccggcggggatgaagaagaggagtgg
ctttatggcgatgaaaatgaaccagaaaaaccagaagaggaggaggaggaaactgtcagt
tctcttcctcctcctgttactgaagaagaaactactgaaaatggtgttacaaaaacgaag
gtgacagagactgaagatgacagcgacagtgacagtgatgacgatgaggatgatgttcac
gtcaccattggagatattaaaactggagcaccacaatatgggagctatggaacagcacca
gtaaatttgaacatcaaaacaggggggagaatctatggagcttctgggcctaaggtaaaa
ggtgtagaccttgatgcacctggaagcattaatggtgtacctcttatagaggtggacttg
gattcttttgaagataaaccatggcgaaaaccaggtgctgatctctcagattatttcaat
tatggatttaatgaagatacttggaaagcttattgtgaaaaacaaaaaaaactaagaact
ggattagaagcattacctgttgcctcaactacaaacaaaataacggtacagcagggcaga
actggaaattcagagaaggagcccacagtccagtcatcaaaaccagattttacatctcct
actaacgttttcaaatcaggagttcctcctcccagaactcctcttgtagaaggagctttc
ccttccccaccagatcacagagatgtcctcttgtaccaaagtaggaaaatctctggcaca
atagatgtcataggacagaccaccacgatcacaagagtagaagggagacggcgtggtgcc
aatgaaaacagcaatattcaggtattatcggagcagtctccctctgaagtagataacaat
tttatcaagccaccacctccatttttccctcctggagctccgcctactcatctgccacca
ccacctttccttcctccgcctccatctgtcagttctgcgccaccccttatccctccacca
ggaataccgataactgtgccaccaccaggttttccaccaccaccttcattgataccaacg
atagaaagtggacattcttctgcgtatgacagtcgctcagcacctacttttccatatggc
aacgttagtttccctcatctccctggttctgcttctccgtggcctagtcttgtggatact
agcaagcagtgggattattactcacgacgagaaaaagagagggagcgtgagagagaacgg
gacagagaaagagatcgagatcgtgaaagagaaagggaaagagaacgtaccagagaaaga
gagcgtgaaagagaaagggaccgtgaacacagcccaagtgcaagtatatataacagagtg
gctggtggtcagttgaaaagtgatgacgaccggtataggtatagagaatatgcagaaaga
ggttatgagcgtcatagagaaagaataagcagggaaaaagaagaaagacatagagaaaga
agacaccgagaaaaggaagaatcatcacgacacaagtcttctcgaagtagcagcaggcgg
cgtcatgatagtgaagaaggagacagccacaggagacacaaacacaaaaaatccaaaaga
aacaaagaaggaaaagagactggaagtgagcctgcccctgaccaggaaaatactgaagct
gcatctgtagaatag
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