Geotrypetes seraphini (Gaboon caecilian): 117360910
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Entry
117360910 CDS
T09159
Symbol
TTLL4
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin polyglutamylase TTLL4
KO
K16601
tubulin polyglutamylase TTLL4 [EC:
6.3.2.62
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gsh03037
]
117360910 (TTLL4)
04812 Cytoskeleton proteins [BR:
gsh04812
]
117360910 (TTLL4)
Enzymes [BR:
gsh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.62 beta-tubulin-glutamate ligase
117360910 (TTLL4)
Cilium and associated proteins [BR:
gsh03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
117360910 (TTLL4)
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
117360910 (TTLL4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
DUF7502
Motif
Other DBs
NCBI-GeneID:
117360910
NCBI-ProteinID:
XP_033801407
UniProt:
A0A6P8QT13
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Position
5:complement(265550317..265867077)
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AA seq
1144 aa
AA seq
DB search
MASASTEQFNISFGKNSHHSSRSFRTQLAEKAQESHVRSHPVQHVKSIWKLERKNVNAVQ
DQKLGHSGILPQRTLCFYSDPFCNARITPPLIAAVHSSPKSRSPCNSSEGTLASQQPTHA
HGSRSYQKLESLCLKFGDLGRRDLSSHHRNPLKCSSATKVNAAESAMSYSVSQYLPQSST
VELPNPVVSSPPIHSGKLVSNSFKPVLNTNLFLRPKSAKVPSNQSRHNRKVKTSYVPQPS
TPQAWHHSGGTGDGLSPNLHSKPLKTSPVALEQTTNVPTALYDQSVASPKLKKPHCQAEE
DEKSQKIFHARNKEVKLTEAVKKVMGNSWGKNLCSDLSLDSDQQTNVGLHNDSSCGKSRG
QTQTSSYASPRQEGNQAHPPILENRNLGYSNPHMVNSNLCTKRISVHFTSSDTPENSVPR
TSVPVKSKDAAFKKAGVQQMNVSDMTVQISTIHLEKKTHNPQKTKWEADSLQDLNTETDW
LLPEQEETEDVERELPENLEHSSSQEDNNDESDCSSEGGLPSSGSVTAISRECENIIPAP
KHEDRIIKPSLTVSIFPNVPPTLYFATRDEMVELMPWAQRKLLRWKLSTVTPNIVKQVIL
RSHFRITKKNHDWLGCWGHHMKSPGFRTIREYQKLNHFPGSFQIGRKDRLWRNLSRMQAR
FGKKEFNFFPQSFVLPQDIKLLKKIWEEGGTRQKWIVKPPASARGIGIQVIHKWSQLPKR
RPLLVQRYLHKPYLISGSKFDLRIYVYVTSYDPLRIYVFTDGLVRFASCKYSSSTKTLNN
KFMHLTNYSVNKKNTEYESNADETACQGHKWALKALWSYLNQKGINSDRIWEKIKDIVVK
TVIASEPYVTSLLKMYVQKPSCCHELFGFDIMLDENLKPWILEVNISPSLHSNSALDINI
KGQMIQDLLNLAGFVLPPKEDVIANNISASSSSMSLSSIEKERPKFMNDLFPEEKVKRSY
YLSQKLPDEDFYSTILDALTPDDVRILVETEDDLXRRGYFERVFPSPISSRYLHFFEQPR
YYNILTDQWEQKYYWNKQRGIDLLRRLCLRNFHIGNISDSYPLWSVPTCHLRNDLLLNGF
SKEVAKLSKPSLQKEKSPSSGEDLFQSFRITCQSGLPMIRSGTVSEKNLLPQSLSSLSDI
ALRV
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgcaagtactgaacaattcaatataagctttggaaagaacagccatcacagc
tcacggagcttcaggacgcaacttgctgagaaagcccaagagagtcatgtcaggagccac
cctgtgcagcatgtgaagtcaatctggaagttggaaaggaagaatgtgaatgcagtccag
gatcagaagctaggacactcagggattctacctcaacgaaccttatgtttctactctgac
ccattttgtaatgccagaattacaccaccattaattgcagctgtacatagttcaccaaaa
tcacggtctccctgcaattcctctgagggtactttggcttctcagcagcctactcatgct
catggaagtagatcttatcagaaactggaatctttgtgcctaaaatttggggatttagga
aggagagacctatcctcacaccacaggaatcccctgaagtgttcatccgccacaaaagtt
aatgcagcggagagtgccatgtcatattccgtgagtcaatacctcccacagagttccact
gtagagctgccgaaccctgtggtgagctcaccacctattcactcaggaaagctcgtttcc
aattctttcaagccagtactgaacaccaatttgttcttacgaccaaaaagtgctaaagtg
ccttcaaaccagtcacgacataatagaaaggtgaaaacttcctatgtacctcaacctagt
acacctcaggcgtggcatcattctggaggtactggagatgggctttccccaaacctgcac
agcaaacctctcaaaaccagccccgttgctttggaacagaccaccaatgttccaacagcc
ttgtacgatcaaagtgtcgcatcacccaaattgaagaaacctcattgtcaagcagaagaa
gatgagaaaagccagaagatcttccatgccaggaacaaggaggtgaagctcactgaagct
gtgaagaaagtgatgggaaacagctgggggaaaaatctctgcagtgacttaagcttagac
tctgaccaacagacaaatgtgggcctgcataatgattcgtcctgtgggaagagcagaggg
caaacccagacttcctcttatgccagtcccaggcaagaagggaaccaagcgcatcctcct
atcttggagaatcgaaacctggggtattctaatccccatatggtcaattccaatctctgc
acaaaacggattagtgttcatttcacaagctcagacacccctgaaaacagtgtccccagg
acttcagtccctgtgaaaagcaaagatgcagctttcaagaaagctggagtccagcaaatg
aatgtcagtgatatgacagtacaaatttctaccatccatttggaaaagaaaacccacaat
ccacagaagaccaaatgggaggcagacagtttgcaagatctgaatacagaaactgactgg
cttcttccagagcaagaagaaactgaagatgtagagagagagcttccagaaaatttagaa
cattctagtagtcaggaggacaataacgatgagtcagactgttcatcagaaggaggatta
ccatcctctggatctgtgactgctatatccagggaatgtgagaacattatcccagcacca
aagcatgaagatcggatcattaaaccatctcttaccgtgagcatcttccctaatgtgcct
ccaactctgtacttcgcaacacgggatgaaatggtggaattaatgccatgggcacagagg
aagctgctgagatggaaactgagcactgtcacaccaaatatagtaaagcaggttatacta
cgctcccacttcagaatcaccaagaaaaaccacgactggctaggatgctggggccatcat
atgaagtcaccaggatttaggaccatccgggaatatcagaagctaaatcattttcctggc
tcgtttcaaattgggaggaaagacagactatggcggaacctatccaggatgcaggctcgt
tttggaaagaaagagttcaacttcttcccgcagtcttttgtattgccacaggacataaag
ctgctgaagaaaatctgggaagagggtggcactcgtcagaaatggattgtgaaaccgcca
gcatctgccagaggcattggaatccaggttattcataaatggagccagctacccaagagg
aggccccttctggtgcaaagatacctacacaaaccctacctcatcagcggaagcaagttt
gatctacgtatttatgtttacgtcacttcgtatgatcctctgcgcatttatgtgtttaca
gatggattggtacgctttgcaagctgcaagtattcatcctccactaagaccctcaacaac
aagtttatgcatctgaccaactacagtgtgaacaaaaagaacacagaatatgaatccaac
gccgatgaaacagcatgccaaggccataaatgggcgctaaaggctctctggagctacctg
aatcagaaaggtatcaacagtgatagaatctgggaaaaaattaaagatattgtcgtcaaa
actgttattgcgtctgagccctacgtgaccagtctgctgaagatgtatgtacagaagccc
tcctgctgtcatgaactctttggatttgatattatgctggatgagaatctcaagccttgg
attctggaggtcaacatttcccctagccttcattcaaattctgctttggacataaatatc
aaggggcagatgatacaagacctcttgaacctggctggctttgtccttcctccaaaggaa
gatgttatagctaacaatataagtgccagcagctcctccatgagtctgtccagcattgag
aaagaaagaccaaagttcatgaatgatctcttcccagaggagaaggtgaaaaggtcatat
tacctgagtcagaaacttccagatgaggatttctattcaaccatcctagacgctctgaca
cctgatgatgtgcgaatcctggtggaaacagaggatgatttgncccggcgtggttacttt
gagcgagtgttcccatctcccatttctagcagatatctacatttctttgagcagccccgc
tattataatattctcactgaccagtgggagcagaaatactattggaacaaacagcgaggt
attgacttgttaagaagattatgtctcaggaattttcatataggaaatatctcagattca
tatcccttgtggtctgtgccaacgtgtcacctgagaaatgacttgcttctcaatggcttc
agcaaagaagttgccaaactgagtaaaccctcccttcagaaggagaaaagtcccagcagt
ggagaagatcttttccagtccttccgtataacctgccagtcagggctgccaatgattcga
agtggcacagtatcggagaagaacctcttaccacagagcctcagtagcctgtctgacatt
gccctgcgtgtgtga
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