Geotrypetes seraphini (Gaboon caecilian): 117360936
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Entry
117360936 CDS
T09159
Symbol
NUP62CL
Name
(RefSeq) nucleoporin-62 C-terminal-like protein
KO
K14306
nuclear pore complex protein Nup62
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117360936 (NUP62CL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117360936 (NUP62CL)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117360936 (NUP62CL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
PilA4
Motif
Other DBs
NCBI-GeneID:
117360936
NCBI-ProteinID:
XP_033801479
UniProt:
A0A6P8QT90
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Position
5:complement(66609043..66683806)
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AA seq
587 aa
AA seq
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MSGFNFGESGSTGGGFSFGTPKTTNSTSAAPAAGFSFSAPGSTGGFSFGTPTQPPATTQA
GGLLSLSTSSTPAQMPGFSFGAQTTSASTAGTVGFSLGANPPKLNLGGTTISQPTGVFGL
ANSVPSSNLPVSQPVAPSGFSFGTSTTLAQPAATAGFAFASGGIQTTNPPSFAIPTVAQA
VQPAASTGLIFGPSGIVTTTAGSTQSTGFQLGQPAGLGFGMLSSSATVATTATPASIGTV
PASTVQGPGLQFGAKLTGIIPASVGAAPVSAPASTLTSLLGSSGPTLFASISSSSIPAIA
TATVTPVTASASLPLSGALTTATSCLGIPGFGLKVHGTAAPAAVTTTATTSTTTSSGFSL
NIKPIATVTTSSTSGTAAPSTSLASTTSTPSVMTYAQLESLINKWSLELEDQEKYFLHQA
TQVNAWDRTLIENGEKITTLHREVEKVKLDQKRLDQELDFILSQQKELEDLLNPLEESMK
EQSGTIYLQHADEEREKTYKLAENIDAQLKRMAQDLKDIIEHLNTSGGPADTSDPLQQIC
KILNAHMDSLQWIDQNSALLQRKVEEVTKVCESRRKEQERSFRIAFD
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggttcaactttggtgaatctgggagcaccgggggaggattcagctttggtacc
ccaaagaccacaaacagcacatcagcagcacctgcagcaggattttctttttctgcacct
ggctcaacaggaggattcagttttgggaccccaactcagcccccagctaccacacaagct
ggaggcctcttatccctctcaacctcttctacacctgctcagatgcctggattcagcttc
ggtgcccagactacatcagcctctactgcaggaacagtaggattttcattaggggcaaat
ccaccaaaattaaatttaggtggtactaccatatcccagccaacaggagtgtttggactt
gccaacagtgtacccagcagcaatttgccagtgagtcagcctgtagctccttctggcttc
agttttggtactagtacaacacttgcccaacctgcagcaactgcgggatttgccttcgcc
agtggaggcatccaaactaccaaccctcctagttttgccatccccactgttgcacaggca
gttcagccagcagcttccacaggtttaatatttggaccctcgggtattgtgacaactaca
gcaggaagtacacaatcaactgggttccagcttggccagcctgcaggactgggatttgga
atgctgtcatcgtctgcaacagtggctactactgcaacccctgcctccataggaactgta
ccagccagcactgttcaggggccaggtttacaatttggagccaaactgacaggcataatt
ccagcatctgtgggagctgctccagtatcagcccctgcctcaacactgacatctctcctt
gggtcatcggggcccacgctatttgcctccatttcaagttcctcaataccagcaatcgca
acagccactgttaccccagtcactgcttctgctagcctaccacttagtggtgctttgaca
actgcgacttcatgtcttgggattcctggatttggtttaaaggtacatggaacagcagca
cctgcagcagttaccaccactgctaccaccagcaccactactagttctggcttttccttg
aatatcaaacctatagcgacggtgacaacttctagcacttctggaactgctgccccctct
acttctttagccagcactactagcactccttcagtgatgacatatgcccagctggagagt
ctgattaacaagtggagcctggagctggaggatcaagagaaatacttcctgcatcaagct
actcaggttaatgcttgggaccgcacactgattgagaatggagagaagattacaacctta
cacagagaagtagagaaagtgaagctggatcagaagaggttggatcaggagctagacttc
atcctttctcagcaaaaggaactggaggacctcttgaatcccctagaggaatctatgaag
gaacagagtgggactatctatttgcaacacgcagatgaggagcgggaaaaaacctataag
ctggcagagaacattgatgcacagctgaagcgcatggcccaggatctgaaggatatcatt
gaacacctgaacacatctggaggccctgctgataccagtgacccacttcagcagatctgc
aaaatcctgaatgcacatatggactcactgcagtggatcgatcagaactctgcactattg
cagagaaaagttgaagaagtgacaaaagtttgtgaaagccgacgcaaggagcaagaacgc
agttttcggattgcatttgattga
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