Geotrypetes seraphini (Gaboon caecilian): 117360944
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Entry
117360944 CDS
T09159
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04145
Phagosome
gsh04148
Efferocytosis
gsh04510
Focal adhesion
gsh04512
ECM-receptor interaction
gsh04810
Regulation of actin cytoskeleton
gsh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117360944 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117360944 (ITGB5)
04148 Efferocytosis
117360944 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117360944 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117360944 (ITGB5)
04810 Regulation of actin cytoskeleton
117360944 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117360944 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gsh04515
]
117360944 (ITGB5)
Membrane trafficking [BR:
gsh04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117360944 (ITGB5)
Cell adhesion molecules [BR:
gsh04515
]
Integrins
Integrin beta subunits
117360944 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
vWA_SIBA-E
EGF_Teneurin
EGF_TEN
RNA_pol_A_CTD
Motif
Other DBs
NCBI-GeneID:
117360944
NCBI-ProteinID:
XP_033801508
UniProt:
A0A6P8REJ3
LinkDB
All DBs
Position
5:245976514..246135924
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AA seq
804 aa
AA seq
DB search
MSRRRAIAACLLPCVFVLCCPLHCVKGLNVCTSGSATSCEECLLIHPRCAWCSKEEVEGI
KSITSRCDHVENLLRKGCTKGFIENPTGSLRIVKDLPLSSKGSSTSHADVIQIIPQNISL
SLRPGAPTSFRVQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRNLGTKLTEEMKKLTSNFR
LGFGSFVDKNISPFSYKAPRYQNNPCIGYKYFPNCLPSFGFRHLLSLTDKVDSFNQEVQK
QKVSRNRDAPEGGFDAILQAAVCKEKIGWRKEASHLLVFTTDDVPHLALDGKLGGLVQPH
DGQCHLNEVNEYSASSEMDYPSLALLGEKLAENNIYLIFAVTKSHYMLYKNFTALIPGTT
VEILDQDSKNIIQLIINAYNSIRSKVEVTVWDHPEDLSLAFTATCQDGLSHPGLRKCEDL
KIGDTVSFDVSVQASSCPASDTKHTFILKPVGFRDTLEVTVAYNCSCGCAAEVEPNSAKC
GSNGTYACGLCKCDAGYLGAKCECREGDNANTYQSMCREAEEKPLCSSRGECSCNQCVCY
ESDFGKISGPFCECDDFSCPRYKGVLCSGHGECVCGECKCHAGFIGDNCNCSTETDRCIS
GDGQMCSGKGSCVCGSCQCTHPGAFGETCEKCPTCPDACTSKRDCIECRLFNSGRLADNH
TCQKLCKDEIITVDDLGTDDQDSTVLCIYKTDSDCVMRFTYSEDVSGKSVLTALKEPECG
SSPDALTVLLAVVGSILLVGFALLAVWKLIITIHDRREFAKFQSERSRARYEMASNPLYR
QPISTHSLDMVFNLLNKTHNGAVD
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgaagaagggcgatcgccgcttgcctcctgccttgcgttttcgttttgtgttgc
ccgctccactgtgtcaaaggtctcaacgtttgcactagtggaagtgctacgtcttgtgaa
gagtgtctgctcatccatccccggtgtgcctggtgttccaaagaggaagtggagggcatc
aaatccatcacatcgaggtgcgaccatgtggagaatctgctgagaaaaggttgcacgaaa
gggtttatcgagaatcccaccggcagcttacgtatagtgaaggaccttcccctgagtagt
aagggttccagcacttctcacgctgatgtcattcagataatacctcagaatatctctctc
agtctgcggcctggtgctccaacttcatttcgagtccaagtccggcaagtggaggactat
cctgtggatttgtactatttgatggacctttccctctctatgaaggatgatttggacaat
atacgaaatcttggaaccaagctgactgaagaaatgaaaaaactcaccagcaacttccgc
ctgggctttgggtcttttgtggacaagaatatttcccctttctcctacaaggcaccccgg
tatcagaacaatccttgtataggatacaagtactttccaaactgcctgccatcctttgga
tttcgccatctactctccctgacagataaggtggacagcttcaaccaggaagtccagaag
cagaaggtgtcccggaacagagatgccccagaggggggctttgatgcaatcctgcaggct
gctgtgtgcaaagaaaagattggttggcggaaggaggcttcccacttattggtgttcacg
acagatgatgtgccgcaccttgctttggatggaaagctaggaggtctggtacagccccat
gatggccagtgtcacctgaatgaagtaaatgaatacagtgcctccagtgagatggattat
ccatcccttgcacttcttggagaaaagctggctgagaacaacatttacctcatctttgca
gtgacaaaatctcattatatgctctacaagaattttacagcactgatacctggaacaaca
gtggagattttagatcaagactccaaaaatattatccagctgataatcaatgcatacaat
agtatccgatctaaagtggaggtgacagtctgggatcacccggaggatctcagcttggcc
ttcacagccacttgtcaagatggattgtcgcatcctggactccggaagtgcgaggatctc
aaaattggagacactgtttcctttgacgtatctgtccaggcgagtagctgccctgcttcg
gacaccaaacacactttcattctcaagcccgtagggttccgcgacaccctggaggtgacg
gtcgcctacaactgcagctgtggctgcgcagccgaagtggagccgaacagcgccaagtgc
ggcagcaacggcacctacgcctgcggcctctgcaagtgtgacgcgggctacttaggagca
aagtgcgaatgccgggaaggagacaatgcgaacacgtatcagagcatgtgccgggaagcg
gaggagaaacccctctgcagcagccgaggggagtgcagctgtaaccagtgcgtctgctat
gagagtgattttggcaagatcagcggccccttctgcgagtgtgacgacttctcctgcccc
aggtacaagggcgtcctctgctcaggtcatggagaatgcgtttgtggggagtgcaaatgc
cacgctggttttatcggggacaattgtaactgctcgacagaaacagacaggtgcatctcc
ggtgacgggcagatgtgcagcggcaagggcagctgtgtttgtgggagttgtcagtgcact
cacccaggagcctttggagagacgtgcgagaagtgccccacgtgtccagacgcctgtact
tctaaaagggactgcatcgagtgcagattatttaactcagggagactggctgacaatcac
acctgccaaaagctttgtaaggacgaaatcattactgtggatgacctcggaaccgatgac
caggacagcaccgtcctgtgcatttacaaaactgacagcgactgtgtgatgcggttcacg
tactccgaggacgtcagtgggaagtctgtcctcacggcgctaaaggagccagaatgtgga
agttccccagatgcacttacggtcctgctagctgtcgtgggaagtatcttgctcgtagga
tttgcccttctcgccgtctggaagctaattatcaccatccatgatcgacgagagtttgct
aagtttcagagtgagcgctctagggcccgatatgaaatggcatccaatccactctataga
cagcctatctcaacacatagtcttgacatggtcttcaacctactcaacaagactcataat
ggcgcagtggactga
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