Geotrypetes seraphini (Gaboon caecilian): 117360958
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Entry
117360958 CDS
T09159
Symbol
DYNC1I2
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04145
Phagosome
gsh04814
Motor proteins
gsh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117360958 (DYNC1I2)
09142 Cell motility
04814 Motor proteins
117360958 (DYNC1I2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117360958 (DYNC1I2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117360958 (DYNC1I2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gsh04812
]
117360958 (DYNC1I2)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
117360958 (DYNC1I2)
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
117360958 (DYNC1I2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
WDR55
Dynein_IC2
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_SPT8
Nbas_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
117360958
NCBI-ProteinID:
XP_033801548
UniProt:
A0A6P8REK6
LinkDB
All DBs
Position
5:complement(201116120..201325137)
Genome browser
AA seq
631 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKESDQKKEPISIQEESDLEKKRREAE
ALLQSMGITPETPMVPPPTSPSSKSVSTPSEAGSQDSGDGAMTSRTLHWDTDPSVLQLHS
DSDLGRGLVKLGMAKITQVDFPPREIVTYTKETQTPVMTQQKEEDEEEEEVVTPKPAAEP
DEVKTVKQEENNVSSAPPYELTEEEKQQILHTEEFLSFFDHSTRIVERALSEQINIFFDY
SGRDLEDKEGETQAGARLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPH
EPDGVALVWNMKYKKTTPEYVFHCQSAVMSAAFAKFHPNLVVGGTYSGQIVLWDNRSNKR
TPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDSMELVHK
QSKAVAVTCMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHSA
VGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVG
RLDLWNLNNDTEVPTASVTVEGNPALNRVRWTHSGREIAVGDSEGEIFIYDVGEQITVPR
NDEWTRFARTLAEINANRADAEEEAANRIPV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagagtgagctgaaggcagagttggagcgcaagaagcaacgtttggctcag
ataagggaggaaaagaaacggaaggaggaagaaaggaagaaaaaggaatctgatcagaaa
aaagaaccaatatctatccaagaagaatctgatctggaaaaaaagcgaagagaagcagag
gcccttcttcaaagtatgggaataacaccagaaactccaatggtcccacctccaacgtct
ccatcttccaaatctgtgagtactccaagtgaggctgggagccaagactctggcgatggc
gccatgacatctaggacgcttcattgggatactgatccatcagttcttcagctccactct
gattccgatttgggacgtggtctggttaagcttggaatggccaaaataacacaagtggat
ttccctcctcgagaaattgttacatatacgaaggagacccaaacaccagttatgactcag
cagaaagaagaagatgaagaggaagaagaagttgtgacacccaaaccagctgctgaacct
gatgaagtaaaaacagtgaaacaggaagagaataatgtttcttctgctccaccttatgag
ctaacagaagaggagaaacaacagattctgcatactgaggagtttttaagtttctttgat
cactccacaagaatagtagaaagagccctttcagaacagattaacattttctttgactac
agtgggagagatctcgaagataaagaaggagaaacacaagcaggggcaagactgtcctta
aacaggcagttctttgatgaacgttggtcaaaacaccgggttgttagttgtttggactgg
tcatctcagtacccagaattacttgttgcctcctataacaacaatgaagatgctcctcat
gagcctgatggagtagcacttgtttggaacatgaagtacaagaagactacacctgagtat
gtttttcactgccagtctgcagtaatgtcagctgcatttgccaaatttcatccaaatctg
gttgttggtggcacatattcaggacaaattgtgctatgggataatcgcagcaataagaga
accccagtgcagaggacccccctttcagctgctgctcacacgcacccagtatactgcgta
aatgttgttggtacgcaaaatgctcacaatctgatcagcatctcaactgatggaaagata
tgttcttggagtctagatatgctttcccagccacaggatagtatggagttggttcataag
caatccaaagcagtagctgtcacctgcatgtctttccctgttggggatgtcaacaacttt
gttgttggaagtgaagaaggttctgtgtacacagcatgtcgccatggcagcaaagctgga
atcagtgagatgtttgaaggacaccaaggaccaatcaccgggattcattgccattcggct
gtaggcgcagttgacttttctcatctttttgttacatcctcatttgactggacagtaaag
ctttggacaactaagaacaacaagcctctgtactcttttgaagataattccgattatgtt
tatgatgtcatgtggtctcccacccatcctgccctttttgcctgtgtggatggagtaggc
aggcttgatctgtggaatctcaataatgacactgaggtaccaactgcaagtgttactgtg
gaaggtaatcctgctctcaatcgtgtgagatggacacattccggaagggaaattgctgta
ggcgattcagagggagagatatttatatacgatgtgggagagcaaattactgtacctcgc
aatgatgagtggacacgatttgctcggacactggcagaaatcaatgcaaaccgagcagat
gccgaggaggaagctgcgaaccgcattcctgtctaa
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