Geotrypetes seraphini (Gaboon caecilian): 117360962
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Entry
117360962 CDS
T09159
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117360962 (ZC3H12B)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117360962 (ZC3H12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
KH_N4BP1_1st
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
YxzE
Motif
Other DBs
NCBI-GeneID:
117360962
NCBI-ProteinID:
XP_033801568
UniProt:
A0A6P8REL3
LinkDB
All DBs
Position
5:complement(12228043..12339459)
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AA seq
961 aa
AA seq
DB search
MVLELPLSAGPGLQRSLPHIQRLFRVRLSLRGAGPGLRVAIEQGAERDRGKAQEYILALC
TPEHTKEESLTPALRKLLCSLRDAIEYESQAVVEVKETSVEISGRQLNVMTAWSMVEKLR
MEKNPSQDERMVAAASTQDPGECSGESDDWTSSESEAEQQGGRLGGGDCCGGSGGSHYRG
KEISNKPHRQLCRSPCLDRPSFSQGSIQVPQDHHLKSQEASSNLNKEYQAKMDFAVKLGY
ASDQIQAVLNKLGADALINDILAELVRLGNKGETEGQGIGSSTTGMLVPRGPCPKEIASP
EVSLEDDVVDNTDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVDWFLEKGHKDITVFVP
AWRKEQSRPDAPITDQEVLRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLSFDSDGII
VSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPE
HKKQPCPYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALVKCGTG
TPTAQGEANSEAKRIAPKRQSDPSIRSVVVEPEERLSTARKSEASSVPSLVSALSVPTIP
PSKSHAAGALNTRSASSPVPGSSQFAHQQSALEHMTSMQYPPILVTNSHGTSVSYAEQYP
KYDSLGDHGYYSMLSDFSNLSISNMHSTDYYVSEQEQGLYSRNSSPCPDSCLSHTSTESY
SSYSDLYLGISDPAPEDNMKVSRPPAQNRLQPFARGYHETLTRVQSYEPAEPKQPLSKQS
ISHLALNIQHAAIGARSSCPGDYPVPQNMHPSATSQPGRALVMTRMDSISDSRLYESNPM
RQRRPPLCREQHASWDPLPGPADHYAYQSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRSP
WVGIAEPREQHIIPEHQYQTYKNLCNIFPPGLVLSVMEKNPHMTDAQQLAAVIVTKLRSG
R
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggagctgccgctgagcgcaggccccgggctgcagcgctccctgccgcacatc
cagcgcctcttccgggtgcgcctgagcctgcgcggcgccgggcccggcctgcgggtggcc
atcgagcagggcgccgagagggaccgcggcaaggcccaggaatacatcttggcattgtgc
accccagaacacactaaggaggagagcctgacgccagcgctgcggaaacttctctgcagc
ctgcgtgatgccatcgaatatgaatcgcaggcagtggtggaagtgaaagagacgagtgtg
gaaatctctggccgacagctgaacgtgatgacagcctggtccatggtggagaagctgaga
atggagaaaaatccctcacaagatgagcggatggtggcagcagcctctacccaagatcct
ggggaatgcagtggagaatctgatgactggaccagttcagagagtgaagctgaacagcag
ggagggaggctaggaggaggagattgctgcggtggatcgggaggcagccattataggggt
aaagagatctccaacaaaccccacaggcagctctgccgatctccctgcttggaccggccc
agcttctcacagggcagcattcaggttccgcaggaccaccacctaaagtcccaagaagcc
tcaagcaatttgaacaaggaataccaagccaaaatggactttgccgtaaagttgggctat
gccagcgatcagatccaagcagtcctcaacaaacttggggcagatgccctcatcaatgac
attttggcagaattggtaagacttggcaacaaaggcgagactgaggggcaaggcattggg
agcagtaccacgggcatgctggttccccggggtccctgcccaaaggagattgcaagccca
gaggtttctctcgaagatgatgtggtggataatactgacaatctgagaccaatcgtcatt
gatgggagtaatgtggcaatgagtcatggcaataaagaagtcttctcctgccgtggaata
cagctggctgtggactggtttctggagaaaggacataaggacatcaccgtattcgtacca
gcttggagaaaagagcaatcccggcctgatgcaccaatcacagatcaggaggtcttgcgc
aggttggagaaagagaaaattctggtcttcaccccatctcggagagtgcagggcaggcga
gtggtatgttatgatgaccggtttattgtcaagctgtcctttgactctgatgggatcatc
gtctccaacgacaactaccgagaccttcaaaatgagaagccagagtggaagaaattcatt
gaagagcgattgctgatgtactcctttgtgaatgacaagttcatgcctcctgatgaccca
ctaggccgccatgggccaagccttgaaaactttttaagaaaaaggcctgtgattccagaa
cataagaaacagccatgtccctatggtaaaaagtgcacgtatggacataagtgcaagtac
tatcacccagaacgggcaaaccagccacagcggtctgttgcagatgagcttcggatcagt
gctaagctctcggcagtgaaaacaatgagtgaaggtgcattggtgaaatgtggcaccggc
acgcccactgcccaaggtgaagcgaactccgaagcgaaacgcatcgctccaaaacgccag
tcagatcccagtattcgctcagtagtcgtggaaccagaggagaggctgtccacagctcgc
aaatctgaggccagctctgtcccatccctggtgtcagcactgagcgttccaaccattcca
cccagtaaaagccatgctgctggtgcactgaacactcgatctgcaagtagtccagtgcct
ggatcgtcacaatttgcccatcagcaatctgctttagagcacatgaccagcatgcaatac
ccacccattctggtgaccaatagccatggaacatctgtgagttatgcagaacagtatccc
aaatatgactctctgggagatcatggttactattccatgctaagtgacttctccaatctg
agcatcagcaacatgcatagcactgattattatgtgtctgagcaagagcaggggttgtac
tccaggaactccagtccctgtcctgacagttgtttgagccatacaagtactgagtcctat
tcctcttacagtgacttatatttgggtatatcggatcctgctccagaggacaacatgaag
gtttctcgacctccagcccagaatcgtctccagccctttgcccgaggttaccacgaaacc
ttaactcgagttcagagctatgagcccgcggagccgaagcagcctctgtccaaacagtcc
atttctcatctagcactaaacatccagcatgcagcgataggcgctcgctcgagttgtcct
ggagattatccggtgcctcaaaacatgcatccttctgctacttcacagccagggcgggcg
ctggtcatgacaaggatggacagcatttctgactcccgcctttatgaaagcaaccccatg
aggcagaggagaccacctctgtgccgagagcagcatgccagctgggatccactgcctggt
cccgcagaccactatgcctaccagtcttatcctttgagtaacaatctcatgcagccttgc
tatgagccagtcatggtgcgcagtatgcctgaaaagatggagcagctctggaggtctcca
tgggttgggatagctgagcccagggagcaacatatcattcctgaacatcaatatcaaacg
tacaaaaatctctgcaatatattccccccaggccttgtcctttctgtaatggagaaaaac
ccgcacatgacggatgcacagcagttggcagctgtgattgttaccaaattacgatcagga
cgctag
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