Geotrypetes seraphini (Gaboon caecilian): 117361082
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Entry
117361082 CDS
T09159
Symbol
ITGB2
Name
(RefSeq) integrin beta-2
KO
K06464
integrin beta 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04145
Phagosome
gsh04514
Cell adhesion molecule (CAM) interaction
gsh04517
IgSF CAM signaling
gsh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117361082 (ITGB2)
04517 IgSF CAM signaling
117361082 (ITGB2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117361082 (ITGB2)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117361082 (ITGB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117361082 (ITGB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsh04147
]
117361082 (ITGB2)
04515 Cell adhesion molecules [BR:
gsh04515
]
117361082 (ITGB2)
04090 CD molecules [BR:
gsh04090
]
117361082 (ITGB2)
Membrane trafficking [BR:
gsh04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117361082 (ITGB2)
Exosome [BR:
gsh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117361082 (ITGB2)
Cell adhesion molecules [BR:
gsh04515
]
Integrins
Integrin beta subunits
117361082 (ITGB2)
CD molecules [BR:
gsh04090
]
Proteins
117361082 (ITGB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
Integrin_B_tail
PSI_integrin
I-EGF_1
vWA_SIBA-E
EGF_2
Motif
Other DBs
NCBI-GeneID:
117361082
NCBI-ProteinID:
XP_033801823
UniProt:
A0A6P8RHJ2
LinkDB
All DBs
Position
5:complement(159356660..159476521)
Genome browser
AA seq
769 aa
AA seq
DB search
MHFLLPWTLTAILHILNSAYSQECPKYKVNTCQECIQSGPGCAWCRKRNFTKAGEPDSAR
CDTVQQLMERGCSETEIFSPESQSFPFGSDVLSNSVQLIPKNIELRLRPEHPANFTVKFR
RAEGYPVDMYYLMDLSYSMKDDLENVKKLGNDLLNALNSITKSAQIGFGSFVDKTVLPFV
NTHPEKLKNPCPEKTSSCQPPFAFKHVLTLTGNGKNFQEQVGKQSISGNLDAPEGGLDAM
MQVAVCGDKIGWRNVTRLLVYATDDGFHFAGDGKLAAILTPNDGHCHLEDNVYKKSNEFD
YPSVGQLAQKLAENNIQPIFAVTNNMVKTYQELSKLIPKSEVGELSQDSSNVLQLIKDAY
QNLSSKVILDHGTTPDSLMITYDSFCSKDKTENKPKGECNNVKINEEISFLIKVTATKCV
PDQSFVIRPLGFTDSLTVKVKAKCDCDCDDALNAGDCSGHGKIHCGICRCDDKFVGKNCE
CATEGRTSQELDVTCRKDNASAICSGLGDCECGICNCHASDDPKKQIYGPFCECDNVNCE
RFNGKICGGEERGICDCGKCKCKTDYEGGACQCEKSTKECSNDQGVCSGRGQCQCNVCIC
KPGYQLPFCEDCIGCPSPCSKYAPCVECIEYGTGAHEKNCSLMCSGLNKTEKTVQNAKVC
KEKDSTNCWMHYEMKQEAGEEKYSFRITKERECPEPPNYAAIIGGTIAGVALIGLVLLLS
WKLVTELIDRREYSRFEKEKSKAKWSDDGANPLFKSATTTVVNPKFSGE
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcattttctcttgccttggacactaacagcgattctccacatactaaattcagcttat
tcccaagaatgcccaaagtataaagtaaacacttgccaagaatgcatccagtcaggccct
ggatgtgcctggtgcaggaaacggaatttcacaaaagcgggagagccagattctgcacgt
tgtgacacagttcagcaattaatggagcggggatgcagtgagacagagattttctctcca
gagagccaaagttttccttttggatctgatgtgctgagcaacagtgtacaactaattccc
aagaacattgagttgcgcctgagaccagagcatcctgccaactttaccgtaaagtttcgc
cgagctgaggggtatccggttgacatgtattacctgatggatctctcctattctatgaaa
gatgatttggaaaatgtgaaaaagttgggaaatgatctgctaaatgcactgaattcaatc
accaaatccgctcagataggttttggttcttttgttgataaaactgtgttaccgtttgtc
aatacccaccctgagaagttaaaaaatccctgcccagaaaagacatcctcgtgccaacct
ccgtttgctttcaaacatgttcttacccttactggaaatggaaaaaactttcaggagcag
gttgggaaacaaagtatttccggaaatctggatgctcctgaagggggtctagacgcaatg
atgcaagttgcagtgtgtggggataaaattggctggcgcaatgtgactcgtttgcttgtg
tatgccacagacgatggcttccattttgctggagatgggaaacttgcagccattctgacc
ccgaatgatgggcactgtcacctggaagacaatgtctacaagaagagcaatgaatttgat
tatccctctgttggtcaactggcacagaaacttgctgaaaataacattcaacccattttt
gcagtaaccaacaacatggtaaaaacttatcaggaattgagtaaacttattccaaagtct
gaagtaggtgagctgtctcaggattccagcaacgtcctccagttaatcaaagatgcttat
caaaacttgtcatccaaggtcattcttgaccatggaaccactccagattctctcatgatc
acatacgattccttctgttctaaagataagaccgagaataaaccaaaaggcgagtgcaat
aatgtcaagatcaatgaggagatttcctttttgataaaagtcacagcgacaaagtgtgtc
cctgatcagtccttcgtaatccgacccttaggcttcactgattcgctgactgtcaaggtg
aaggcaaaatgtgattgtgactgtgacgatgctttaaatgcaggtgactgcagtggccat
ggaaagatacattgtggaatctgcagatgtgatgataaatttgtgggtaagaactgtgaa
tgtgcaacagagggcagaaccagtcaagaactggacgtgacctgcaggaaagacaacgct
tcagcaatatgctctggacttggggactgcgagtgtgggatttgcaattgccatgccagt
gatgacccaaagaagcagatttatgggcccttctgcgaatgcgacaatgtgaattgtgag
cgcttcaatggcaagatttgtggtggggaagaaagaggaatctgtgactgtgggaaatgt
aaatgcaagacagattatgaaggtggtgcgtgccaatgtgaaaaatcaactaaagagtgc
tcgaatgatcaaggtgtgtgcagtggacgtgggcaatgtcagtgcaacgtttgcatttgc
aaaccaggctaccagcttccattctgcgaagactgcattggctgcccttcaccctgttct
aaatacgcgccttgtgtggagtgcatagaatatgggactggtgcacatgagaagaactgt
tctctcatgtgttcaggtcttaataagacagaaaagacagtgcaaaatgcaaaagtctgc
aaggaaaaagactccacaaactgttggatgcattatgaaatgaaacaggaggcaggtgaa
gaaaaatactcctttaggatcacaaaggagagagaatgtccagagcctcctaattatgca
gctatcattgggggcaccattgctggtgttgcactaattggcctggtgctccttctatcc
tggaagctggtgacagagctgattgaccggcgagagtacagtcgatttgaaaaagagaaa
tcaaaagccaagtggagtgatgatggtgctaacccactttttaagagtgcgactactaca
gttgtcaaccctaagttcagcggagaatga
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