Geotrypetes seraphini (Gaboon caecilian): 117361142
Help
Entry
117361142 CDS
T09159
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117361142 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117361142 (XRCC5)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
117361142 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
Motif
Other DBs
NCBI-GeneID:
117361142
NCBI-ProteinID:
XP_033801973
UniProt:
A0A6P8RF12
LinkDB
All DBs
Position
5:258615428..258784318
Genome browser
AA seq
763 aa
AA seq
DB search
MLDYGRRNQWTATEDGRAEKRNWDQLYGKISLQTTKSAVVLCMDVGFSMGNVVPGEESPL
ELAKKVMTLFVQRQVFAESKDEIAVVLFGTDGTDNALSQRDQYQNITVHRHLMMPDFYLL
EDIQTVITTGSQQADFLDALIVCMDLLQKETLGKKYERLNIAVFTDLSSPFSMDQLDIII
ANLKRTGITLQFFLPFPLDSDGDEGGSGEQNGGSGDWSYTDRPKGCLPEKGLTGQQRDGI
QMVKKVMTTLDEEGGLDEVYTFKESLDQLSIFKKIERRPMPWPCLLTIGSNLSIKIVGYK
AVTEENVKKSWSIVDAKTQRKEDVQKETVYCLNDDNETEVPKDDTIQGYRYGSDIIPFSK
VDQEQMKYKHDGKCFSVLGFTKSSQIQRNHFMGKQILKIFPPKDDEAAAVALSALIQALD
ETNMVAIVRYAYDRRSNPQVGAAFPCIKDKYECLMYVQLPFMEDLRQYLFSSLKNKNFIP
TEEQLSAVNSLIDSMSLVHDDGETIEDLFKPSKIPNPRFQRLFQCLQHKAFHPDDPLPCI
EQQLLDMLERPQEVTAKCQESLEKIKKHFPLQQASIKKAQKTADDIFQNRNEDEPNAKKA
KTEEDSEFSIAHLAEGNITSVGSVNPEHDYRILVMRKNANIKEVSQQLIDRIYECLEAKG
LQYYMKSLKCIAAFRQEAIKLSIVQQFNSFLKTLKEKVEDRSLKEFWDIIVQDGLSLITS
DEEAGSSVTTEEAKRFLAPEEKTAETTSVADEHGDVDDLLDMM
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgctggattatggtaggagaaaccaatggacagctacagaagatgggagagcagaaaaa
agaaactgggaccaactttatggaaaaataagtctccagacaacaaagagtgcggtggtt
ctgtgcatggatgttggcttttcgatgggcaatgttgttcctggagaagagtctcctctt
gagttggccaagaaggtgatgacgctgtttgttcagcgacaggtgtttgccgagagcaag
gatgaaatagcggtggtactgtttggcactgatggcacggacaatgccctgagccaaaga
gatcagtatcagaacatcaccgtgcacagacacctgatgatgccagacttttatctgttg
gaagacattcaaactgtgatcacgacaggttctcagcaagctgacttcctggatgctctc
atagtttgcatggaccttctgcagaaggagaccctggggaagaagtacgaaaggctgaac
attgcagtgttcacagatctcagcagccccttcagcatggaccagctggacattatcata
gcaaacctgaagagaactggcatcaccctgcaattcttcttgccttttccactggacagt
gatggtgacgaaggaggaagcggggagcagaatggtggcagtggtgattggtcctacaca
gatagacccaaaggttgccttcctgaaaagggtctgacggggcaacagagagatgggatc
cagatggtgaaaaaggtcatgacgactctggatgaagaaggaggactggatgaagtttac
acattcaaggaaagcttggatcagctatccatctttaagaagattgaaaggagacccatg
ccttggccatgtttactaaccataggttcaaatctgtctatcaagattgtgggctacaag
gcagtcacggaggagaatgtgaagaagagctggagcattgtggatgccaaaacccagagg
aaggaagatgtccagaaggaaactgtttactgcttaaatgatgacaatgaaacggaggtg
ccaaaagatgataccattcaaggataccgctatggcagtgacattattcctttctccaaa
gtggaccaggagcaaatgaagtacaagcatgatggaaaatgcttttcggtcttgggattc
acaaaatcttctcagatccagagaaatcattttatgggaaagcagatcctgaagatcttt
ccaccaaaggatgatgaggctgcggctgtggcactttctgctctcatacaggcattggat
gagaccaacatggtggcgattgtgcgatatgcttatgacagacgatccaacccccaagtt
ggcgcagcttttccttgcatcaaggacaagtacgagtgtctgatgtatgtacagcttccc
ttcatggaagatttaaggcagtacctgttttcctccttaaaaaacaaaaatttcattcct
acagaggaacagctgtcagcagtcaactctctaattgactccatgagtctggtgcatgat
gatggggagacaattgaagatctctttaaacctagcaaaatccctaaccctcggttccag
aggttgtttcagtgtttacaacataaggcctttcatcctgatgatccactgccctgtatc
gagcagcagctcttggacatgctggagaggccacaagaagtaactgcaaagtgccaggag
tctttggaaaaaataaaaaaacatttccctctgcaacaggccagcataaaaaaggcacag
aagacagcagacgacatctttcaaaacaggaatgaagacgagccaaatgctaaaaaagcc
aaaactgaggaagacagtgaattcagtattgcacacctggctgaagggaacattacttct
gtcggcagtgttaatcctgaacatgactatcgtatcttggtgatgaggaagaacgcaaac
atcaaagaagtgagtcagcagttgattgaccgaatctatgaatgtctggaagccaaaggc
ttgcaatactacatgaagagcctgaaatgcatcgcagcctttcggcaggaggctattaag
ttgtccattgtgcagcagttcaatagttttctgaagaccctgaaagagaaagtggaagac
cgaagtttaaaagagttctgggacattattgtacaagatggcctttccctcattaccagt
gatgaagaagctgggagctctgtcactactgaagaagccaaaaggttccttgcccccgaa
gagaaaacggctgaaacgacatcagtagcagatgaacatggtgatgtggatgacttactg
gacatgatgtaa
DBGET
integrated database retrieval system
