Geotrypetes seraphini (Gaboon caecilian): 117361164
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Entry
117361164 CDS
T09159
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117361164 (RLIM)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117361164 (RLIM)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117361164 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
117361164
NCBI-ProteinID:
XP_033802026
UniProt:
A0A6P8QUX9
LinkDB
All DBs
Position
5:complement(14886357..14949058)
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AA seq
664 aa
AA seq
DB search
MLTVQNIGFPNSGFQKTFTCVTRESPRKIEEKAEQQNRFVSLFDLSINMESADSNDKGSA
DQSDAQRQSQMDRLDREEAFYQFVNNLNEEDYRLMRDNNLLGTPGEITEEELLRRLQRIK
EGPPPQNSDENRGGEDSSNGDAIIDWLNSVRQTGNTTRSGQRGNQSWRAVSRTNPNSGDF
RFSLEINVNRSNANPNPEHENENENESSPEASNAEDVENNSQSDTEIPGSDVPSTRQAIP
ERPTSEELIAEEVSSFRGQRRARSRSPEQRRTRARTDRSRSPLNPVTETPRRAHHNISSQ
TFDNSLVSEAEGSSRTRQHVTQSQTLNNEAEGSSRTRQHVTLRQQMTGTEISTPSTVQFS
VPETRNAPPATTLETTGSSEPAAPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQ
TPNNTVTYESERGGLRRTFSRSEQAGVRTYVSTIRIPIRRILNTGFSETTSVAIQTMLRQ
IMTGFGELNYFLYDSDTGGPGPVPNPTVEAVEPPNGGSSSSSIGEGTEASPGEVYEGGNV
GGSTSGPRRESRNSRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLSTRL
FGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASANR
ESVV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgctgacagtacagaacattggtttcccaaactctgggtttcagaagactttcacgtgt
gtcacaagagagagtcccaggaagattgaggagaaagcagagcaacaaaacagatttgtt
tcactttttgacttatccatcaacatggaaagtgcagattctaacgataagggaagtgct
gatcaatcggatgctcagcgtcaaagccagatggatcgattggatcgagaagaagctttc
tatcagtttgtaaataacctgaatgaagaggactataggcttatgagagataacaatttg
ctgggaacccctggtgaaataactgaagaagaattgctgagaaggctgcagcgcattaaa
gaaggtccaccaccgcaaaacagtgatgagaacagaggtggagaggattcttctaatggt
gatgccatcatagactggttgaattcagtcagacagactggaaatacaacacgaagtgga
caaagaggaaaccagtcatggagagcagtgagccggacgaaccccaacagtggcgacttc
agattcagtttggaaataaatgtcaatcgtagtaatgcaaatccaaatccagagcatgaa
aatgaaaatgaaaacgagtcatcaccagaagcttctaatgcagaagatgtggaaaacaac
agccaaagtgataccgaaattccaggatctgatgttccatctaccaggcaggccatacca
gagaggcccacgtcagaagaattaatagctgaagaagtttcttcatttagaggccaaaga
agagcaagaagcaggagcccagaacaacggaggactcgagcaaggactgatagaagtaga
tcacctcttaatccagtaacagagacacctcgccgagctcatcataatatctcgtctcag
acttttgataattctctagtcagtgaggctgaaggaagctctagaactagacagcatgta
acacaatctcagactttaaataatgaggccgaaggaagctccagaactaggcagcatgta
acattaaggcagcaaatgactgggacagaaatatcgactccaagtacagttcagttttct
gtcccagagacaagaaatgctcccccagcaaccactttagaaacaactggtagcagtgaa
ccagcagcaccagggcaaaggcctccaaccattgtccttgaccttcaagttagaagagtt
cgtccaggagaataccgacagagagatagcatagctaacaggactcgctccagatcccag
acaccaaataacactgtcacatatgaaagtgagcgtggtgggctgaggcgtacattctcc
cgttctgagcaggcaggagtgcgaacttatgtaagtaccatcagaattcccattcgtagg
atcttgaacacaggcttcagtgagaccacgtcagttgcaattcagaccatgctgaggcag
ataatgactggctttggagaattaaattactttttgtatgactcagacacaggaggtcca
ggcccagttccaaatccaactgttgaagctgtagaacctccaaatggtggcagtagtagt
agctctattggtgaaggtaccgaagctagccctggtgaagtatatgaaggtggtaatgta
ggaggttcaacatctggccccagacgggaaagtcgaaatagtagagggtcggtcaccttt
gaagaaagtggctctctaccattcctcagtctggcccagtttttcctcctcaatgaagat
gatgatgaccaaccaagagggctcaccaaagaacaaattgacaacttatctactagactc
tttggtgaaaatgatgctctgaaaacctgtagtgtctgtatcactgaatatacagaaggt
aacaaactccgaaaactaccttgttcacacgaataccatgtccactgcattgatcgttgg
ttatcagaaaattctacatgtcctatttgccgccgtgcagtcttagcttctgcaaacaga
gaaagtgtagtctga
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