Geotrypetes seraphini (Gaboon caecilian): 117361258
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Entry
117361258 CDS
T09159
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117361258 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117361258 (ATRX)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117361258 (ATRX)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
117361258 (ATRX)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
117361258 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
117361258
NCBI-ProteinID:
XP_033802235
UniProt:
A0A6P8R2G5
LinkDB
All DBs
Position
5:complement(16197849..16841135)
Genome browser
AA seq
2280 aa
AA seq
DB search
MRESKLNALVQKLHEFLAHSSEDSEETNSPTGQSLSKDLAKGDKSISGPYLMENNKEEGN
SPLEISKSLGSSRSKRKPSFVTKYVESDDEEMLDEVLNEDVSNENSENDVDVNSLPKGTV
VVQPEPVLNEDKDDFKGPEFRSRTKLKVETPKKRAEEGLHGIVSCTACGQQVNHFQKDSI
YRHPALQVLICKTCYKYYMSDDINRDADGMDEQCRWCAEGGNLICCDYCHNAFCKKCILR
NLGRKELSTIMDENNKWYCYICHPEPLLDLVTACDSVFENLEQLLQQNKKKIKETEKSKI
YDHMQKLSQKKSSNCNGQDKSLDNSYSGAITYTYKALMVPKDLLKKAKKIIETTTNLNAS
FINFLKQETVNSDINSMVKLRQLKAFRSVLGDLRKAHLALEEGLNVEIQNLDIKSKVKNT
KEMSAVNDKQERKKKIEKEEQNVAENVKKYIHSDEDLEGEINASNDREQAEETNADQDET
EDFGINDNNVENGMANNGKNNSDAEKNKADGKKIYEREENMCNKGQKKSSEKIKTVDRKE
NKDPEMEKKNVSKQKHKERKVEEKKEQCSSKAKDINHMSELEEVADNQTVDQTDGSEEEM
ESDGPVQKSIASREPKYEPKSSEGLDMDILSVPSSVPEDIFESLDSAVGGNASDSLKKGN
TMLQQEMTLKSPAASIKNILVLSKGSRESKLKTTKLRKELFVKLTPVSLSSSPVKVGRTE
EGEDEGHYEMHKESGNDSIKPEDNYDCIPKNDSPLQVEEFELRRSPRVKTTPKRRQTDTN
PLTSNTDVESNDTDSDTSKQKSKAQSKEQKEKQNSSESIGESTQFKSESKKVRIAEKNER
GLSDSDDMPEILKEAVMMSHSSSDLDSNNELLESVKSPCDLRSKTQKSKKGKRKRKGSSS
DSEHNCTKGKSTRNSTVTKKKRQNISDYTNYDSELEKEIKSLSKIEAAKKPKKKLPKNVK
DEESANSSQEDYKKHVKAKLEKKVKNESVKDKKCFKKGQNVSSSSSSDGEEDDQAEEENS
SGGSSDEQKIKPVTENVMLSSPVGFCQSSGDEGENKSRLAAIEDDDDDDDPENRIAKKML
LEEIKANLSSDDDGSSDEESDIEKKKSGKPNENAEDGEDEGGEDNSESESDSAKKPRYRH
KLLRHKLSMSDESEEEKKERKSKDSKDNKRRNRRKVSSEDSDDSECQESGVSETVSESDS
EDGQRPRTRATKKEEENLRSYKQKKKRRRIKVQEDSSESKNSSEDGDGEGDNDDDNDDDD
DDSKSPGKGRKKIRKILKVDKLRTETQNALKEEEERRKRIAERERERKKLREVIVNEDTS
LVKCPITTKLVLDEDEETKEPLVQVHRNMVTKLKPHQVDGVQFMWDCCCESSKKLKRESG
SGCILAHCMGLGKTLQVVAFLHTVLLCEKLDFSTALVVCPLNTVLNWTNEFEKWQDGLED
DESLQVAELATVKRPQERGFMMQKWQEDGGILIIGYEMYRNLAQGKNVKSKKLKDIYYKT
LVDPGPDFVICDEGHVLKNEASAISKAMNSVRTRRRIILTGTPLQNNLIEYHCMVNFIKE
NLLGSVKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFL
PPKYEYVLAVRMTSIQCKLYRYYLDNLTGLSGNSEGGRGKAGAKLFQDFQMLSRIWTHPW
CLQLDYISKENKGYFDEDSMDEFIASDSEETSMSLSSEEESKKKNSKGKKRKRDSDSSES
GSDNDVEVIKVWNSRSRGGGDGNTEEISNSTPDVKTEESKAAPSSNPSSPAPDWYKDFVT
EADAEVLEHSGKMTLLFEILRMAEELGNKVLVFSQSLISLDLIEDFLELANKAKSEDTPS
IYKGEGKWYRNIDYYRLDGSTNAQTRKRWAEDFNDETNVRGRLFIISTKAGSLGINLVAA
NRVVIFDASWNPSYDIQSIFRVYRFGQNKPVFVYRFLAQGTMEEKIYDRQVAKQSLSFRV
IDQQQIERHFTMNELTELYSFEPDLLDDPNSEKKKKRDTPVLPKDTLLAELLQIQKEHIV
TYHEHDSLLDHKEEEELTEEERKTAWAEYEAEKKGLTMRLNMPPGTTQPQPNFNSPSPYM
PLNLGALSSLSNQQLEDLINQGREKVVEATNNITSVRIQPYEDILTAVWKENPNLTEVQV
QSLALSRKANMEMEIKHREAIYNDVLTKQQMLISCVQRILMGRRLQQQYNQQQQHIAYQQ
AALSHLMIQKPPNLILNPSAYPQIDMRGMYQTVAGGMQPPPLQRSPPSMRSKHAGPSQGK
NT seq
6843 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaagcaagttgaatgctcttgttcagaagcttcatgaattcttagctcactct
tctgaagattctgaagagacaaattctccaactgggcagtctttgagcaaagatttagct
aaaggtgacaagtctatcagtggaccttatctaatggagaacaataaggaagagggaaac
agtccattggaaatctccaaatcattaggatcttcacgttctaaaagaaaaccttcattt
gtaaccaaatatgttgaatcggatgatgaagaaatgttggatgaagttcttaatgaagat
gtgtcaaatgaaaactctgaaaatgacgttgatgtgaatagtttacctaaaggtacagtg
gtcgtgcaaccagaaccagtgctgaatgaagataaagatgattttaaaggtcctgaattt
agaagcagaacaaagcttaaggttgaaactcctaaaaaacgtgcagaggaaggtctccat
ggaattgtgagttgcacagcatgtggtcagcaagtgaaccattttcagaaagattccatc
tatagacatcctgctctacaagtccttatttgtaagacatgttacaaatattatatgagt
gatgatattaatcgtgatgcagatggaatggatgaacagtgcaggtggtgtgctgaaggg
gggaacttaatttgctgtgactactgccataatgccttctgcaaaaaatgcatcctgaga
aacttgggtcggaaggaactgtctactataatggatgaaaacaacaagtggtattgctac
atttgtcacccagagcctttattggacttggttactgcatgtgacagtgtttttgagaac
ttggagcaattgttgcaacaaaataaaaagaagataaaagaaactgaaaagagcaaaata
tatgatcacatgcagaaactttctcaaaagaaaagttctaattgtaatggacaagacaaa
agtttagataactcatattctggtgctataacatatacatataaagcactcatggtgcca
aaggacttgctgaaaaaagcaaaaaaaattattgagacaacaacaaacttgaatgctagc
tttataaattttttgaagcaagagactgtaaattcagacataaactccatggtaaaattg
agacagcttaaggctttcagatctgtattgggtgatctcagaaaggctcatcttgcatta
gaagaaggtctcaatgtggagattcaaaatttagatattaaaagcaaagtgaaaaatacc
aaagagatgtctgctgtgaatgataagcaagaaagaaagaaaaaaattgagaaggaagaa
caaaatgtagctgaaaatgtaaagaaatatattcattctgatgaagacctagagggtgag
atcaatgccagcaatgatagagaacaggcggaggagactaatgctgatcaagatgagaca
gaagactttgggatcaatgacaataatgttgaaaatggaatggcaaataatggtaaaaat
aattctgatgctgaaaagaacaaagctgatggaaagaaaatttatgagagagaagagaat
atgtgtaacaagggtcagaaaaaaagcagtgaaaagatcaaaacagttgatagaaaagag
aataaagatcctgagatggagaagaaaaatgttagtaaacagaaacacaaagaaaggaaa
gttgaagagaaaaaagaacaatgctcatctaaagcaaaagatattaatcatatgtctgag
ttggaagaggttgcagacaatcaaacagttgatcaaactgatggctctgaggaagaaatg
gaaagtgatgggccagttcaaaaatctatagcaagcagagagccaaaatatgaacccaag
tcttcagaaggtctagacatggacatcttgtctgtcccatcctctgttcctgaagatatt
tttgaaagtctggactcggctgtgggtgggaatgcatccgattccttgaagaaagggaat
acaatgctacagcaggaaatgacactaaagtcaccagcagcatctataaaaaacattttg
gtgctttcaaagggcagcagagaatccaagttaaagacaactaaattaagaaaagagttg
tttgtaaaactgactcctgtttcactttccagttctcctgtaaaagttggccgaacagaa
gagggagaagatgaaggccactatgaaatgcataaggagagtggaaatgattctatcaaa
cctgaggataactatgactgcattcctaaaaatgattctccattgcaagtagaggagttt
gaacttagaagatcccctcgtgttaaaacaacccccaaaagacgtcaaacagatacaaat
cccttgacatcaaatacagatgtggaaagcaatgatacagacagtgacacatccaaacag
aaatcaaaagcacaatcaaaagagcaaaaggaaaagcaaaattcttcagaaagtattggt
gaaagtacccaatttaaatcggaatccaaaaaagtaagaattgcagaaaaaaatgagaga
ggtttatctgattcagatgatatgccagagatcctaaaggaagctgttatgatgagtcac
agttcatcagaccttgatagcaataatgagttacttgaaagtgttaagtctccatgtgat
ttaaggagtaaaacacaaaagagtaaaaaaggaaaacgaaaaagaaaaggctcaagttca
gattctgaacataattgtacaaaaggcaagtcaactagaaattctactgtgacaaagaag
aaacggcagaacatttcagactacacaaattatgactccgagctggaaaaagaaattaaa
agtttaagcaaaattgaagcagcaaaaaaacccaagaagaaactgcctaagaatgtaaaa
gatgaagaaagtgcaaactcttctcaagaagattataaaaagcacgtaaaagcaaagctt
gagaagaaagttaaaaatgaatctgtaaaggataaaaaatgtttcaagaaagggcagaac
gtatcctcttcctcctcctccgatggagaggaggatgatcaagcagaggaagagaattca
tcaggaggaagcagtgatgaacagaagattaaaccagtgacagaaaatgtcatgctttct
tcacccgttggattttgtcagtcttcaggggatgaaggagaaaataaatcgaggcttgct
gccatagaagatgatgatgatgacgatgatcctgagaatagaattgccaagaaaatgctt
ttggaagaaatcaaagccaacctttcatcagacgatgatgggtcttcagatgaggaatca
gatattgagaaaaagaagtctggaaagccaaatgagaatgctgaagatggtgaagatgaa
ggaggggaagacaattctgagtccgagtctgattctgccaagaaacccagatacaggcac
aaactgctgaggcacaaattaagcatgagtgatgagtccgaggaagagaaaaaagagaga
aaatcaaaggactcgaaagataataagcgtaggaaccgaagaaaagtgagcagtgaagat
tctgatgattctgagtgccaggaatccggtgttagtgagactgtgagtgaaagtgattca
gaagatgggcagcgtcctagaacaagagccacaaaaaaagaagaagaaaatctgagaagt
tacaaacagaagaagaaaagacgacgtataaaggtacaggaggattcaagtgaaagcaaa
aacagctctgaggatggtgatggtgaaggtgataatgatgacgacaacgatgatgatgat
gatgattcaaaatctcctgggaaaggcaggaagaagatacgaaagattctcaaagttgat
aaactcagaacagaaactcagaatgctctgaaagaagaggaggagcgaaggaagcgtatt
gcagaaagagaacgagagaggaagaagttgagagaggtgatagtgaatgaagatacttca
cttgtaaagtgcccaataaccaccaaattggttctagatgaagatgaagaaaccaaggag
ccattagttcaagttcataggaatatggttacaaagctaaagcctcatcaagtagatggt
gttcagtttatgtgggactgctgttgtgaatcttcgaaaaaattaaagagggaatctggg
tctggatgtatccttgcacactgcatgggtctagggaagaccctgcaggtggtagctttt
ctccatacggttctgctatgtgaaaagttggattttagcactgccctagtagtatgtcca
ttaaatacagttttgaactggacaaatgaatttgagaagtggcaagatggtttagaagat
gatgaaagcctacaggtggctgagcttgctacagtgaaacggcctcaggagagaggtttt
atgatgcaaaagtggcaggaagatggagggattttgatcataggttatgagatgtatcgt
aatcttgcacaaggcaaaaatgtgaagagcaaaaagctaaaagatatatactacaaaaca
ctagttgatccaggccctgattttgtaatttgtgatgagggacatgtactgaaaaatgaa
gcttcagctatttccaaggccatgaattcagtacgaacacggaggaggattatcctaaca
ggaacaccactacaaaataatctaatagagtaccactgcatggtaaattttattaaggaa
aatttgcttggttctgtgaaggaattcagaaatcgatttattaatccaatccagaatggt
cagtgtgcagattctaccatggtggatgtccgtgttatgaaaaagcgtgctcacattctg
tatgagatgttggcaggatgtgttcagagaaaagattacacagcccttacaaagttcttg
ccacccaaatatgagtatgttctagctgtgagaatgacttcaattcagtgcaagctgtat
cggtactacttggataacttaacaggtttaagtgggaacagtgaaggtggaagaggtaag
gctggagccaagcttttccaggacttccagatgctgagcagaatctggactcacccttgg
tgtttacagctggactatattagcaaagaaaacaagggttactttgatgaagacagtatg
gatgagttcatagcttcagattctgaggaaacatcaatgagtttaagctctgaagaagaa
tccaagaaaaaaaactccaaagggaaaaaaaggaagagagattctgattccagtgaaagt
ggtagtgataatgatgttgaagtgatcaaagtctggaattctaggtctagaggaggtggt
gatggaaatactgaagaaatttcaaacagcactcctgatgtaaaaacagaagaaagcaaa
gctgcaccgtcatctaaccccagcagtccagctccagactggtacaaagattttgtcaca
gaagcagatgctgaagtgctggaacattctgggaaaatgactctcctctttgaaattctt
cgtatggcagaagaactgggaaataaagttctagtctttagccaatcgctgatatcacta
gatttaatagaagacttcctagaactggcaaataaagcaaaatcagaagatacaccatct
atttacaaaggtgaaggaaaatggtatagaaatattgattactatagattagatggttct
accaatgcacagaccaggaaaagatgggcagaggacttcaatgatgaaacaaatgtaaga
ggccgtttgtttattatttccactaaggcaggatccctgggaattaatcttgtggctgct
aaccgtgttgtcatctttgatgcatcttggaatccctcttatgacattcagagtatcttc
agggtttatcgctttgggcagaataagcctgtctttgtgtacagattcttggcacaggga
acgatggaagaaaagatctatgatcgccaggtagccaaacaatcgctgtcctttcgagtg
attgatcaacagcaaattgagcggcattttacaatgaatgagctgacagagctctactct
tttgaaccagatttgttggatgatcctaattcagaaaagaagaaaaagagggacacacct
gtgctgccaaaggatactttgctagcagaattgcttcagatccagaaagagcatatagtg
acatatcatgaacatgattctcttctggaccataaagaagaagaggagttaacagaggaa
gagaggaagacagcttgggcagaatatgaggcagaaaagaagggtttgactatgcgccta
aatatgccacctgggactactcaacctcaacccaattttaactctccatctccatatatg
cccttaaacttaggagcattgtcttcactgagtaatcaacagcttgaggaccttatcaac
caaggcagagagaaagttgttgaagcaaccaacaatataacatcagtgagaattcagcct
tatgaagatatattaacagctgtgtggaaagaaaatccaaacctgactgaggttcaagtt
cagtctttggcactaagtagaaaggcaaatatggaaatggaaattaaacaccgagaagcc
atctacaatgacgttcttacaaagcaacagatgttgatcagttgcgtgcagaggatactg
atgggcagaagactacagcagcaatacaatcagcaacagcaacatatagcttatcagcaa
gcagcattgagccacctcatgattcagaaacctccaaacttgatcttgaatccctctgcc
taccctcagattgatatgaggggaatgtaccagactgtggctggaggcatgcagcctcca
ccattgcagcgttcaccaccttccatgagaagcaaacatgcaggaccttcccaagggaaa
taa
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integrated database retrieval system
