KEGG   Geotrypetes seraphini (Gaboon caecilian): 117361324
Entry
117361324         CDS       T09159                                 
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsh03019]
    117361324 (ATXN2L)
Messenger RNA biogenesis [BR:gsh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117361324 (ATXN2L)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM14 AHJR-like
Other DBs
NCBI-GeneID: 117361324
NCBI-ProteinID: XP_033802389
UniProt: A0A6P8QY70
LinkDB
Position
5:complement(91426147..91840684)
AA seq 987 aa
MLKQQQPLPPPVVRKPMAGGAGNPSPGSPNGSVSPSAAGIISNNSNTFTQRPGSVVTSRS
RSAPKGPSPSPVFEGVYNNSRMLHFLTAVVGSTCDVKVKNGTVYEGIFKTLSSKFELAVD
AVHRKVTEQLAGPKREDIIDTMVFKPMDVMLVHFRNVDFNYATKDKFTDSAIAMNAKVNG
EHKEKVLQRWEGGDGNSDDYDLESDVSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTIPL
EKDNTEEFRQRELRAAQLAREIESSPQYRMRIAMENDDERTEEEKHSSVQRQSSDRDSPS
LGCREGKYIPLPQRVRDGSRGGMRTSTSRGGRPIGSLPPRGSLHHSESNCSPASEQRGIN
GGPSRISPKAQRPIRGSKTMSSPSSRPVEVSPLPPTTVGRMYPPRSPKSGSTAPSISSQD
SPVGSAVPSAPTSPPESRISAESSSSMNPQSPKTTSSTVFAPSEAKDVLACGAKDGSRPL
DVTTLSDLTKSSCKGLQIDQKRNQLEELRKFGEDFRLQPSSTSDAGHESLPSRVKNGIEV
KDKVSDTEGAEDSILMLAEKCSGTDSEQLEGPKEDKTLCEGTSSPHNRTDPEEREEGPVS
DQVKKSTLNPNAKEFNPAKPLLSVNKATNSPASPGPRTHCSSAIPMLATGQSGMYSQYIS
YIPQIHMSPAVQAPQMYPYPVSNSVPGQQGKYRGTKGGSLPPQRSDQHQPASAPPIMQAA
AAAGPPLVAATPYSSYISYNPQQFPGQPTMMQPMAHYPSQPVFAPMIQSNPRMMASGSHP
QAMVSSSTPQYPPTEQPTPQTLYAAVHQPYSHHAPQLHPHQPQPATTPTGSQQQGQHAAP
SPVQAGQPPHLGSAQQQQNLYHAATLTATPPSLTPGPTAQSPQSSFPQQAVYAIHAHQQL
QHSYTNMAHVTQAHVQTGISGAPPPPHPPQVMLLHPSQTHGGPPQAAVQQSGVPAISANT
PTQYTYIGHHQVPSHPPQQLPFHPPGN
NT seq 2964 nt   +upstreamnt  +downstreamnt
atgctcaaacagcagcagccgctgccaccacctgtcgtacgtaaacccatggcgggagga
gcaggaaacccctcacccggtagtccaaatggaagtgtgagtccttctgcagctggcatt
atcagcaacaacagtaacacttttacccaacggcctggatctgttgtaaccagcaggagt
cgcagtgctcccaagggaccttcgccttcccctgtatttgaaggtgtttataataattct
cgaatgctgcattttttaactgcagttgtgggctcaacctgtgatgtaaaggtaaaaaat
ggaacggtctatgaagggattttcaaaactttaagttctaagtttgagcttgctgtggat
gctgtccataggaaggtgactgagcagttggcaggacctaagcgagaagacataattgac
accatggtctttaaacccatggatgtaatgctggtgcatttccgaaatgtggatttcaac
tatgcgacaaaagataaatttacagattcagccattgccatgaatgcgaaagtgaatgga
gaacataaagagaaggttttacaacgttgggaaggaggtgatggcaacagcgatgattat
gatctggaatctgatgtgtctaatggctgggacccaaatgaaatgtttaaatttaatgaa
gagaattatggagtgaagactacatatgacagcagcctgtcttcctacacaattcctttg
gaaaaagataacactgaggagttccggcagagagaattacgggcagcacagttggcaaga
gagattgagtccagcccacagtaccgcatgcgtatcgccatggaaaatgatgatgagcgc
acagaggaggagaagcacagctctgtgcagcggcagagctctgacagggatagtcccagt
ttaggctgcagggaaggaaagtacattccgctgccccagcgtgtcagagatggatctcga
ggtggcatgaggaccagcacatcgcgtggaggacgccctattggatctttaccaccacgt
ggcagcttgcatcactcggagagcaattgcagccctgcatcagagcaaaggggaattaat
ggaggaccatcccgtatatcccccaaggcccagcgtcctatccgtggctctaaaacaatg
tcatctccttcaagtcgtcctgtagaagtctctccgctgcctcctacaacagttggtcga
atgtacccaccgcgctctccaaagtctggttccactgccccttcgatatcttctcaagat
tctcctgtagggtctgctgtcccttctgctcctacttctcctcctgaatctagaatctct
gcagagtccagttcttccatgaatccacaatctcccaaaactacctcctccacggtgttt
gctccttctgaagcaaaagatgttcttgcttgtggagcaaaggatgggagtcggccttta
gatgtgacgacactgtctgatctcacaaagtcatcttgcaaagggctacaaattgatcag
aagagaaaccagttagaagaactgcgaaagtttggagaggacttcaggttgcagccaagc
agtacctctgatgctggtcatgagtctctgccatctcgggtgaaaaatggtattgaggtg
aaagacaaagtgtctgatactgaaggggcagaggactcaatcctgatgctggcagagaag
tgcagtggaacagactctgagcagctagagggtcctaaggaggacaaaacgctgtgtgaa
gggacctccagccctcacaataggacggaccctgaggagagagaggagggaccagtctct
gatcaagtgaagaaatcaacacttaatcccaatgcaaaggagttcaatcctgctaagcca
cttctatctgtgaacaaggctacaaatagcccagcatctcccggcccaagaacgcattgt
agcagtgccattccaatgctagcaactggacagagtgggatgtacagtcagtacatctct
tacatccctcagattcacatgagtcctgctgtgcaggctccacagatgtatccatatcca
gtctctaattctgtacctgggcagcaaggaaagtacagaggtaccaaaggaggttctctg
ccccctcagcggtcagaccagcatcagcctgcttcagctcctccaatcatgcaggcggca
gcagcagcaggacctcccttggttgcagcaacaccctattcatcatatatttcttacaat
cctcagcaatttcctgggcaacccaccatgatgcagcccatggctcattatccctcccag
cctgtctttgctccaatgattcagagtaatccacgaatgatggcatcagggagccatcca
caagccatggtttcctcttctactcctcagtatcctcctacagagcaacccaccccccaa
actctctatgctgcagttcatcagccatactctcatcatgctcctcagttgcatcctcac
caacctcagccagccacaacaccaacaggaagtcaacagcagggtcaacatgcagcccct
agccctgtgcaggcaggtcagccgcctcatcttggcagtgctcagcaacagcaaaactta
taccacgcagcaaccttaacagccactcctccatccctgactcctggacccactgctcag
tctccacagagcagctttccacagcaagcagtttatgccatccatgcacaccagcagtta
caacatagttataccaacatggcacatgtcacccaggcccatgttcagactggaatatct
ggagctccccctcctcctcatcccccacaggttatgctccttcatccttctcagactcat
ggagggccacctcaggcggcagtccagcagagtggcgttccagccatttctgcaaacacc
ccaacacagtacacttatataggacatcatcaagttccatctcatcctcctcaacagctt
ccattccatccccctgggaactga

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