Geotrypetes seraphini (Gaboon caecilian): 117361362
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Entry
117361362 CDS
T09159
Symbol
ITGB6
Name
(RefSeq) integrin beta-6
KO
K06589
integrin beta 6
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04510
Focal adhesion
gsh04512
ECM-receptor interaction
gsh04810
Regulation of actin cytoskeleton
gsh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117361362 (ITGB6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117361362 (ITGB6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117361362 (ITGB6)
04810 Regulation of actin cytoskeleton
117361362 (ITGB6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsh04147
]
117361362 (ITGB6)
04515 Cell adhesion molecules [BR:
gsh04515
]
117361362 (ITGB6)
Exosome [BR:
gsh04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117361362 (ITGB6)
Cell adhesion molecules [BR:
gsh04515
]
Integrins
Integrin beta subunits
117361362 (ITGB6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_TEN
vWA_SIBA-E
EGF_Teneurin
WD40_Apc4_C_fungal
Motif
Other DBs
NCBI-GeneID:
117361362
NCBI-ProteinID:
XP_033802460
UniProt:
A0A6P8R311
LinkDB
All DBs
Position
5:213441798..213625693
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AA seq
788 aa
AA seq
DB search
MGVELFYLFFLLLQRNDSVQGSCSSRSAVTCEDCLLFGPHCAWCSQENYTDSLGFGGRCD
TPEILLSKGCNLSFIEFPISEIEIHRNNPLSEGTQSNSSDVTQIAPQKLVLKLHAGNQVT
LQVNVRQTEDYPVDLYYLMDLSASMVDDLTMIKELGSTLSREMSKLTSNFRLGFGSFVEK
PVSPFIKTVPQEISNPCRIAQITCSPTFGYKHVLPLTENAEEFNEIVKKQSISANVDSPE
GGFDAILQAAVCKEKIGWRNDSLHLLVFVSDEDSHFGMDSKLAGIVIPNDGLCHLDSNNE
YSMSTVLEYPTIGQLIDKLVENNILLIFAVTQEKAYLYEGYAKLIPGATVGHLQKNSGNI
LQLIIDAYKELRSEVDLEVLGDTEGLTLSFTALCSKDKVLPHLKKCSNIKVGDTVSFNVT
IGLTTCEKKSRHIIIKPVGLRDTLEIEIRPECSCTCQNSVDVNSTKCSKGNGSFECGVCL
CHPGYIGPHCECSEDLLSINSCKGAPEHDSCSGRGDCNCGQCNCHSSAYGRIYGQHCECD
DFSCVRFKGLVCAGHGDCDCGECVCHNGWTGEYCNCTTNFDTCMSADGELCSGRGECVCG
KCICANPGVSGSTCERCPICGDPCNSKRSCIECTLASEDQSQEECIEKCKLADATVSKTE
GFSKDKSVFCSLQGENKCLITFLMAPDEKGRTVIYNINQKDCPEPPNIPMIILGVSLAIL
LIGFVLLCIWKLLVSFHDRKEVAKFEAERLKAKWETGTNPLYKGSITTFTNVTYKQQEKQ
KGDAMDTY
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgggggttgaattgttttacctgtttttcctacttctgcaaagaaatgacagcgtgcaa
ggaagctgttcttctaggagcgcagtgacctgtgaagactgcttgctttttggaccacac
tgtgcatggtgctcccaagagaattacactgactctttgggctttggaggaagatgtgat
actccagaaatccttttgtcaaaaggatgtaatttaagttttattgaatttccgatttca
gagatagaaattcatagaaataatcctcttagcgaaggcactcagagtaatagctcggat
gtcactcagattgcgccacaaaagcttgttctgaaactgcatgcaggtaaccaagtaacg
ttgcaagtcaatgtgcgccagactgaagattacccggtggatttgtattacctcatggac
ctctctgcttccatggttgatgacctcaccatgattaaggaattaggatccactctatcc
agagagatgtctaaattaacaagtaactttagactaggtttcggttcttttgtggaaaaa
ccagtttcacctttcatcaaaacagttcctcaggaaattagcaatccttgtaggattgct
caaatcacttgctcgcctacctttggatataaacatgttttaccattaactgaaaatgct
gaagagttcaatgaaattgtgaagaaacagagtatttcagctaatgtggacagcccagag
ggcggctttgatgcaattctacaagcagctgtctgtaaggaaaaaattggctggcgaaat
gactctttgcatctcttggtgtttgtaagtgatgaagattctcactttggaatggacagc
aagctggctggcattgtgatcccaaacgatggtctttgtcacctggacagcaataatgag
tattccatgtctactgtgctggagtatccaacaattgggcaattaattgacaaacttgtg
gaaaataatattttgctcatttttgctgtaacacaagaaaaagcctatttgtacgagggc
tatgccaaacttattccaggggccacagttggacatcttcagaaaaactctggaaacatc
ctgcagttgatcattgatgcatataaagagctgcgttcggaagtagacctggaggtgctg
ggagacacagaaggcctcaccctttccttcacggcactttgcagcaaggacaaggttctg
ccacacctgaagaaatgctctaacataaaagtaggggacacggtttctttcaatgtaact
ataggtctaacaacctgtgagaagaaaagcaggcatattataataaagccggtgggcctg
agagatacgctggagattgagatccgacctgaatgcagctgcacgtgccagaacagtgtg
gatgtgaacagcaccaagtgcagcaaagggaatggctccttcgaatgtggagtttgcctc
tgccacccgggctacattggccctcactgcgaatgcagcgaggatctgctgagcataaac
tcctgcaaaggtgccccagagcacgattcctgctctgggcgtggggactgtaactgcgga
caatgtaactgccactcctcagcctatgggcgcatttatggacagcactgtgaatgtgac
gatttttcatgcgtgagatttaaaggactggtgtgcgcaggtcacggagactgtgattgt
ggggaatgtgtatgccacaatggctggactggtgaatactgcaactgtacaaccaatttt
gacacatgtatgtctgcggatggagagctctgcagtgggcgtggagaatgtgtttgtgga
aaatgtatctgtgctaaccccggggtctctggaagcacctgtgaaagatgccccatatgt
ggtgatccctgcaactctaaacggagctgcatagaatgcactctcgcttctgaagaccag
tcacaggaggaatgcatagagaaatgtaaattagccgatgccactgtcagcaaaacagaa
ggtttttccaaggataaatctgttttctgctctttgcaaggtgaaaacaaatgtcttatt
acattcctgatggctccagatgagaagggaaggacggtcatttataacataaaccagaaa
gattgcccagaacctccaaacattcctatgataattctaggggtttctctcgctatcctt
cttattggttttgtactgctgtgcatttggaagttgcttgtttcgtttcatgatcgtaaa
gaagttgccaaatttgaagcagaaagattaaaagccaaatgggaaacgggaacaaatcca
ttatataaaggctcgatcactacttttacaaatgtaacttacaaacagcaagaaaagcaa
aagggtgacgcaatggacacgtactag
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