Geotrypetes seraphini (Gaboon caecilian): 117361391
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Entry
117361391 CDS
T09159
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117361391 (SMARCAL1)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117361391 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DEAD
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
117361391
NCBI-ProteinID:
XP_033802534
UniProt:
A0A6P8R385
LinkDB
All DBs
Position
5:259048254..259177061
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AA seq
985 aa
AA seq
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MSLSLTEEQKRRIEENRQRALARRAERLAAKPQDMKQPNGGQVLAKTANQTCSNRLEGWQ
QQYVKQGNRSEFLHQNTHNPTGPIQGKPPSAEVQQPTVRPHGIPQRSNPAVGTSLDGHNS
RSEPVGSMQNSSSPCFVGSDSHNKVQQTSSHPEFLQPSYPSGFNKVTAAMLSDSNTLEQT
SSTEFMLSLNKNGIECVGNEESQCVNSADWESSCNSEMKRDSETKNGTNVSHFYGAKQAL
KPFAAGENVALTDGKAQVSSASSGGALSGTVLLKKVPNALKGKCMKHSEDRFRVEVGYNA
ELISLFKTLPSRNYDPVSKMWNFNLEDYNDLMQAVQCLPSVTLQPLEGMDAKDFPQASLP
SSTMLLMCKNLQKPSAILRGRCVLVSRSRFEVDIGYHPDSIGAFKQISSRNYDMKTRKWS
FLLEDYQRLSEALRSFPSLQVEPLPKAVVQTFASQFEKTSTDPVDVPEAELSRVDSKLVN
SLMPFQREGVNFAVSREGRLLLADDMGLGKTIQAICIAAYYRKEWPLLVVAPSSVRFSWA
EAIHRWLPSIDPDGISVIVTGKDNLSASLVNIISFDLLCKMDKQMIASFKVVIIDESHFL
KNMKTARCKAAMPLLKAARRVILLSGTPAMSRPSELYTQITAVRPSFFPRYQDFGLRYCN
AKKMPWGWDYSGSDNLNELKLLLEESLMIRRLKADVLSQLPAKQRKMVVVAMEGMNAKTR
AALAASAKEMAKGYKNKQQEKEALLLFYNRTAEAKVRCAVEYIVDLLESGREKFLVFAHH
KLVLDAVCEELKRKEVGYIRIDGSTPSAERQNLCQKFQFSEKCQVAVLSLTAANMGITLS
AADLVVFAELFWNPGVLIQAEDRVHRIGQSSSVNIHYLVAKGTADDYLWPMIQEKMKVLG
QAGLSETNFSQTTESTDFFYKDPKQKTIYDLFQRSFSKDGDEVDEALLLEACQEMEQESI
TLSVDSTDSTSPCKKRRIDDFFSKQ
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgagtctcacagaagaacagaagagaaggattgaagagaacaggcaacgggcc
ttggctcggagggcagagaggctggcagctaagccgcaggatatgaaacaaccaaatgga
gggcaagtgttggccaagaccgcaaaccagacttgttcaaatcgtctagaaggttggcag
cagcaatacgtaaaacaagggaatcggagtgagtttcttcatcagaacacacacaaccca
actggtcccatccaaggaaagcctccttctgcagaggtgcagcaaccaacagttcgccct
catggaattccacagcggagcaatcctgcagtgggcaccagcctcgatggccacaattca
aggtctgagcctgtgggatctatgcagaactcttccagtccttgttttgtgggatctgat
agtcacaacaaagttcaacagacatcttctcatccagagttcttacagcccagctatcca
tccgggtttaataaggttacagcagcaatgctctctgattcaaacacccttgagcagact
agcagcacagaattcatgctcagtctgaataaaaatggcattgagtgtgtcggcaatgaa
gaaagtcagtgtgtgaactctgctgattgggaatcatcttgtaactccgaaatgaagagg
gattctgagacaaagaatggcactaatgtttcccacttttatggtgcaaagcaagctttg
aagccttttgcagctggtgagaatgtggcattaactgatggcaaggctcaggtgtccagt
gccagcagtgggggtgcgctttcaggcactgtgcttttaaaaaaagttccaaatgctctt
aaaggaaagtgcatgaagcacagtgaggatcgattccgggtggaagttggctataatgca
gaacttatttccttgtttaagactctgcccagcaggaattatgatcccgtctccaagatg
tggaatttcaacctggaggactacaatgatctcatgcaagcggtgcagtgccttccttca
gtgactttgcagcctctggaggggatggatgccaaggatttcccacaggcatctctgccc
tcaagtaccatgctgctgatgtgcaagaacttgcaaaagccgtctgccatcctgagaggg
aggtgtgtgctcgtctcccgatcccgcttcgaggtagacattggctaccatccagacagc
atcggtgcatttaaacagataagctccaggaactatgacatgaagaccagaaaatggagt
ttcctgctggaagattaccaaaggctaagtgaagccctgcgtagtttcccatccctgcaa
gtggaaccgctgcccaaggctgtggttcagacttttgcctcccaatttgaaaagacctcg
acagatccagttgatgttccagaggccgaactatccagggtagactccaaattagtgaac
agtctgatgccattccaaagggaaggagtgaactttgctgtgtccagggaaggtcgcctg
cttctcgctgatgacatgggcctgggaaagaccattcaagcaatctgcatcgccgcatat
taccgcaaggagtggccgttgttggttgtggctccatcgtctgtgagatttagctgggca
gaggctattcacaggtggctgccatctatagaccctgatggtatcagcgttatagtgacc
ggcaaagataacttgtcggcaagcttggtaaacataatcagctttgacctcctctgcaaa
atggacaaacagatgattgcgtctttcaaagtcgtcattatagatgaatctcattttctg
aagaacatgaagacggcgcgatgcaaggctgccatgcctctcctcaaggctgctaggaga
gtgatcttattgtccggtactccagccatgtcccggccatctgagctttacacccagatc
actgctgtgagaccatcatttttcccacgttaccaggactttgggctccgctactgtaat
gcaaagaagatgccctggggctgggactactctggatctgacaacctgaatgagctgaag
cttttgcttgaagaatcactgatgatccgccgactgaaggctgatgttctatcccagctc
ccagccaagcagcgcaaaatggtggtagtggccatggagggaatgaatgccaagaccagg
gcagcgctggcagcatcagccaaggagatggccaaagggtataaaaataaacaacaggaa
aaagaagcccttttgctcttctacaacaggactgcagaggccaaagtacgatgtgcagta
gagtacattgtggatttgttggagagtggaagagagaagttcttggtatttgctcatcac
aagctggttctggatgcagtatgtgaagagctgaagaggaaggaagttggctacattcgc
atcgatggcagcaccccttcggctgagcgtcagaacctgtgccagaagttccagttttcg
gagaagtgtcaagtggctgtgctgtctctcacagcagctaacatggggataactctttct
gctgcagatctggtggtgtttgctgagctcttctggaatccaggcgttctcatacaggca
gaagatcgtgtacatcgcattggacagtccagttctgtgaatattcattatctcgtggct
aagggcactgctgatgattatctatggcctatgattcaagaaaagatgaaggttcttggc
caggctggtctgtcggaaacaaacttctcccaaacaacggaatcaactgatttcttctat
aaggatccaaagcagaagaccatctatgacctgttccagaggtcattctcaaaggacgga
gatgaggtggatgaggctttgctactggaggcctgccaggagatggagcaagagagcatc
accctcagtgtggacagcactgactcaacaagcccctgcaagaagaggcgcattgatgac
ttcttcagcaagcagtga
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