Geotrypetes seraphini (Gaboon caecilian): 117361429
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Entry
117361429 CDS
T09159
Symbol
SNX4
Name
(RefSeq) sorting nexin-4 isoform X1
KO
K17919
sorting nexin-4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117361429 (SNX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117361429 (SNX4)
Membrane trafficking [BR:
gsh04131
]
SNARE
SNARE associated proteins
Others
117361429 (SNX4)
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
117361429 (SNX4)
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
117361429 (SNX4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
Vps5
Motif
Other DBs
NCBI-GeneID:
117361429
NCBI-ProteinID:
XP_033802638
UniProt:
A0A6P8QYW3
LinkDB
All DBs
Position
5:245191315..245358798
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AA seq
403 aa
AA seq
DB search
MEDNCLLKKIEIGVSEAEKRNGKTSMNMQETYTAYLIETRSVESQLEGQNTPPDSLWRRY
SEFELLRNYLLVTYPYVVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFLLRVAS
HPILCQDKIFYSFLTQESGWKEAVCETGFQLKVDSRLKSLNATFRVKNPDKRFTQLKHYS
DELQSAISHLLRVRARVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDVFA
ASIDDILEEEEHYADQLKEYLFYAEALRAVCRKHELMQYDLEMAALDLAAKKQQCEELAT
GTVRTFSLKGMTSKLFGQETQEQREAKIKSLEEQIEEEEEELKAKNVESSEFVKSAWTDI
DHFKEQKNRDLKEALISYAVMQISMCKKGIQVWTNAKECFSKM
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggaggataattgtttactgaaaaaaatcgagattggcgtttcagaagcagaaaaacgg
aatgggaagacttcaatgaatatgcaggaaacatatactgcttacctcatagagacaaga
tctgttgagagccagcttgagggtcaaaatactcctcctgattcgctgtggcggcgatac
agtgaatttgaactactgcgaaattatttgctagttacctacccatatgttgtcgttcca
cctttaccagaaaaaagggcagagtttgtctggcataagctgtcggcggataatatggat
ccagacttcgtggaaagacggcggattggtttggaaaacttccttttacgtgtagcttct
catcccatcctctgccaagacaaaatcttttattcttttttaacacaggaaagtggatgg
aaggaagctgtttgtgagactgggtttcaactaaaggtagattccagattaaaatctcta
aatgcaacatttagggtgaaaaatcctgacaagagattcacccaactaaaacattatagt
gatgagttgcagtctgccatatcacaccttctgcgagttagagctagagtggcagatcgt
ttgtatggtgtgtacaaagtgcatgggaattatggaagagtattcagtgaatggagtgca
atagaaaaagagatgggagatgggctgcagagtgctggccatcacatggatgtctttgca
gcgtctattgatgacattttagaagaagaggaacactatgcagatcagctgaaagaatat
cttttctatgctgaagctctgcgggcagtgtgcaggaaacatgagcttatgcagtatgat
ttggaaatggcagctctggatctggcggctaagaaacagcaatgtgaggagctggcaaca
gggactgtgcggaccttctctttgaaaggaatgaccagcaagttgtttggacaggaaact
caagagcaaagagaagcaaagataaaatcattagaagaacagatagaagaagaagaagaa
gagttgaaggctaaaaatgtggaaagcagtgaatttgtgaagagtgcttggacagatatt
gaccattttaaagagcaaaagaaccgtgacttgaaagaggcccttataagctatgcagtc
atgcagattagtatgtgtaaaaagggaattcaagtttggacaaatgctaaagaatgcttc
agcaagatgtga
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