Geotrypetes seraphini (Gaboon caecilian): 117361444
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Entry
117361444 CDS
T09159
Name
(RefSeq) protein NEDD1-like isoform X1
KO
K16547
protein NEDD1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117361444
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gsh04812
]
117361444
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
117361444
Microtubules and associated factors
gamma-tubulin ring complex
117361444
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
117361444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WD40_like
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_SPT8
eIF2A
WD_LRWD1
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
117361444
NCBI-ProteinID:
XP_033802677
UniProt:
A0A6P8QX07
LinkDB
All DBs
Position
5:complement(109556365..109559083)
Genome browser
AA seq
657 aa
AA seq
DB search
MQESTRFASSGDDIKIWDPSSMTVVEQFNPHNSSHAVTSLCWSSNNHFLVSASGCGDKIV
VSSCKSKPVPLLELAEGKKQTCVNLNSSSQYLVSGGLDNTVNIWDLKSKRLHRSIKDHKD
EVTCVTFNGNDCYLASGSTSGEIILHNVTTNLSSTPFGHGSSQPVRQLKYSFLKKSLLGS
VSDGGTVTLWDANTQNAFHVFDNAHKAPASGICFSPVNDLLFVTIGLDKRIICYDASSKI
QLRTLVAESSLTAVDFMPDGASLAIGSSRGKIYQYDLRMLTSPVKTVGGHKTSVQCIRFK
HSNISAKSGGGKNASKIAPLLSATMNKKGTVKSGSANTAKNVISTASVSVLPPPLTASEG
KTIDSIQDKMGVPRSTSLNVIPSKETDYTKGSDLQNLDTFGRSSLGDMFSPVRDDSGTCK
TSEDLAAKEDALDFVQQFGSSSSTRRNPVGVSARGSQSSSHCFFGASPIKEEDENQETNA
KTQKTLPAKQEPREPLKQLTKLSSSSADSSGNINTPSIMKTPEADEKRGSENHVQLTCDS
PVNGISLASPKKTTSVTAAVASTLSEKISDTIGSDRTSAPLTPIQIHFIKNMIQETLDDF
REACHRDIVNLQVEMIKQFHMQLNDMYVLLERYSVNEGLVAEIEKLREKNKKLRTHY
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaagcaccagatttgcctcatcaggagatgatattaaaatatgggacccttca
tccatgacagtggtggaacaattcaatccacataattcttcccatgcagttacctcactg
tgttggagtagtaataatcattttctggtgtctgcttctggctgcggtgataaaattgta
gtttcaagctgcaagtcgaaacctgttccacttttagagcttgccgaaggtaaaaaacag
acctgtgtaaatttaaattcaagctcccaataccttgtgagtggaggccttgataataca
gtgaatatttgggatttaaaatccaagaggcttcatcggtctataaaggatcataaagat
gaagtgacatgtgtaacctttaatgggaatgattgttatttggcctctggctcgacaagt
ggtgaaattattttgcacaatgtgactaccaacttatccagtaccccctttggtcacggg
agcagccagccagttcgacaactcaaatactccttcctgaagaaatctttactgggtagt
gtatcggatggtggaactgtaactctctgggatgcaaacactcagaacgctttccatgta
tttgacaatgctcacaaagctccagcctcggggatctgtttttctcctgtcaacgacttg
ctatttgtaaccattggtttagacaaaagaatcatttgttacgatgcttcaagtaagata
caattgagaaccctggtagctgaatcttctctgactgcagtagactttatgcctgatgga
gcctctctggcaatcggatcttcacgtggaaagatctatcagtacgatttgcgaatgttg
acatctccagtaaaaacagttggtggtcataagacttctgtgcaatgcatacggttcaag
cacagtaatatctctgcaaaatctggtggtggtaaaaatgcaagtaaaattgcacccttg
ctgtctgctaccatgaataaaaaaggcactgttaaatcaggtagtgccaataccgccaag
aacgtcatttcaactgcatctgtatcagtgttacctccacctctaacagcatctgagggg
aaaaccatcgattctatccaggataaaatgggcgtacctcgtagcaccagcctcaatgta
attccatccaaggaaaccgattatacaaaaggttcagatttgcaaaacttggatacattt
ggaagaagcagcttgggggacatgttctctcctgtcagagatgattctggaacttgtaag
acaagtgaagacttggcagctaaagaagatgctctagacttcgtacagcaatttggctca
tcatcttccacaagaagaaatcctgtaggtgttagtgcacgtgggtcacagtcgtcatca
cattgtttttttggtgcatctccaattaaagaagaggatgaaaatcaggaaacaaatgcc
aagactcagaaaacacttcctgcaaagcaagagcccagagaaccattaaagcagcttaca
aaattaagttcatcaagtgcagattccagtggaaatattaacactccgtcaataatgaag
actccagaggcagacgaaaagagaggtagtgagaaccatgtacagctaacctgtgattct
ccagtaaatggtatttctttggcaagtccgaagaaaaccacctctgtcactgcagcagtt
gcaagtacattgtcagaaaaaatatcagatactattggaagtgacagaacaagtgcaccc
ctgacaccaattcagatccatttcattaaaaatatgatacaggagacgttggatgatttc
agggaagcatgccatcgagacattgtgaatctgcaggtggaaatgataaaacagtttcat
atgcagctgaatgacatgtatgttttacttgaaaggtattccgtaaacgaaggtctggta
gcagaaatagaaaaactcagagagaaaaacaagaaactgcgaacccactattga
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