Geotrypetes seraphini (Gaboon caecilian): 117361506
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Entry
117361506 CDS
T09159
Symbol
RBMX
Name
(RefSeq) RNA-binding motif protein, X chromosome isoform X1
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117361506 (RBMX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117361506 (RBMX)
Spliceosome [BR:
gsh03041
]
Common components
Common spliceosomal components
hnRNP proteins
117361506 (RBMX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_5
RRM_7
RBD_DEAH11
PHM7_cyt
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117361506
NCBI-ProteinID:
XP_033802827
UniProt:
A0A6P8QXE5
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All DBs
Position
5:41268453..41311337
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AA seq
373 aa
AA seq
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MVEADRPGKLFIGGLNTETNEKALESLFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPA
DAKDAARDMNGKSLDGKPIKVEQATKPSFETGRRGGPPPPPRSRGPPRGGLRGGRGGSGG
PRDYFPFPSGGSRGALPMKRGPPPRSGGPPPKRSAPSGPIRSSGMGGRAPMSRERDSYGP
PRRDPLPPRRDVYLSPRDDGYSAKDSYSSRDYPSSRDTRDYAPSPRDYAYRDYGHSSSRD
DYGSRGYSERDGYGRDRDYADHPGSYRDSYESYGNSRSAPPARGPPPSYGGSSRYDDYSS
TRDGYGSRDSYSSRSDLYSSGRDRVGRQERLPPSMERGYPPPRDSYSSSSRGAPRGGGRG
GSRSDRGGARSRY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagcagatcgacctggaaagctgtttattggtggactgaatacagaaactaat
gagaaggctcttgaatcgctgttctgcaaatatggtcgtgtagtggaagttttgttgatg
aaagatcgtgaaacaaataagtcaagaggatttgcctttgtcacctttgagagtccagca
gatgcaaaggatgctgctagagatatgaatggaaagtctttggatggcaaacccattaaa
gtggaacaagccacaaagccttcatttgaaactggaagacgaggaggaccacctcctcct
ccaagaagtcgtggtcctccaagaggtggtcttagaggtggaagaggaggaagtggagga
ccaagagattacttcccctttccttcagggggatccagaggagcgctacctatgaagaga
ggtcctccaccaagaagcggtgggccaccacctaaacgatctgctccatcaggaccaatc
cgtagcagtgggatgggaggaagagctcctatgtcacgtgaaagggacagctatggccca
ccccgaagggatccattgccacctagaagagatgtatatctctctccaagagatgatggt
tacagtgccaaagacagttactcaagcagagattatcctagttcaagggacacaagagat
tatgctccatctcccagagattatgcctacagagattatggtcattccagttctcgtgat
gattatggatcaaggggatatagtgaacgtgatggttatgggcgtgatagggactatgct
gatcatccaggatcttacagagattcatatgagtcatacggtaactcacgtagtgctcca
cctgcacgagggcccccaccatcatatggtggaagcagtcgatatgatgattacagcagc
actcgagatggatatggaagccgtgacagttactcaagcagaagtgatctctactcaagt
gggcgtgatcgtgttggcagacaagagcgtcttccccctagcatggaaaggggctatcct
cccccacgagattcatacagcagctcaagtcgtggtgcacccagaggtggtggccgtgga
ggcagccgttctgatagaggcggtgccagaagcagatattaa
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