Geotrypetes seraphini (Gaboon caecilian): 117361533
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Entry
117361533 CDS
T09159
Symbol
SOX3
Name
(RefSeq) transcription factor SOX-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117361533 (SOX3)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117361533 (SOX3)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117361533
NCBI-ProteinID:
XP_033802893
UniProt:
A0A6P8RG17
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Position
5:38526662..38527618
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AA seq
303 aa
AA seq
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MYSMLESDLKSPVAQPNSAGGGSAAPGAKSGADQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGADWKLLSDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDK
YSLPGNLLAPGASPVASAVGVGQRIDTYAHMNGWTNGAYSLMQDQLGYTQHPAMNSPQIQ
QMHRYDMTGLQYSPMMSSAQSYMNAASTYTMSPAYGQQGATAMSLGSMGSVVKSEPSSPP
PAITSHSQRACLGDLRDMISMYLPPGGDATDPASLQSSRLHSVHQHYQSTGTGVNGTVPL
THI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggagagtgacctcaagagccccgtggctcagccgaactcggccgga
gggggcagcgcggccccgggggccaagagtggcgcggaccaggaccgggtcaagaggccc
atgaacgcgttcatggtgtggtcgaggggtcagcgccggaagatggcccaggagaacccc
aagatgcacaactccgagatcagcaagcgactgggcgccgactggaagctgctgagcgac
gccgagaagagacccttcatcgacgaggccaagaggctgcgggcggtgcacatgaaggag
tatccggattataaataccggcccaggaggaagaccaagaccctcctgaagaaggacaag
tactccctgcctggcaacctgttggctccaggagcgagcccggtggccagcgcggtgggc
gtcggccagcggattgatacctacgctcacatgaacggctggactaatggagcttattct
ctgatgcaggaccagctgggctacacccaacacccggccatgaacagcccccagatccag
cagatgcatcgctacgacatgacgggcctccagtacagccccatgatgtccagcgcccag
agctacatgaacgcggcttccacgtacaccatgtccccggcctacgggcagcagggcgcc
actgccatgagcctgggctccatgggctcggtggtgaaatcggaacccagctcccctccg
ccggccatcacctctcacagccagagggcctgcctgggcgacctgcgagacatgatcagc
atgtacctacccccgggaggtgacgccaccgaccccgcttctctccagagcagcaggttg
cacagtgtccatcagcactatcaaagtactggcactggggtgaatggcactgtaccactg
actcacatttaa
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