Geotrypetes seraphini (Gaboon caecilian): 117361587
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Entry
117361587 CDS
T09159
Symbol
NHEJ1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117361587 (NHEJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117361587 (NHEJ1)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
117361587 (NHEJ1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
117361587
NCBI-ProteinID:
XP_033803024
UniProt:
A0A6P8QZW7
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Position
5:complement(265127791..265398584)
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AA seq
302 aa
AA seq
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MDLDLLLQPWRSIAFGNSKFLAKICFSETGYALLISDLTGVWHEEVDASIVQVRSKELNK
RLKAPVCSFLKHLSELLQPLLLGGQTDHSSASFSCQRNDSKLNIHVKSELSDLPFHWGFY
CGEASGSLVSRHLLQPLMRMNLALEHQSQQLMALLLQKDLEIQDYRESGAMLSRGRLETE
VFDEKCFLEKFLCKSLPDVCRGGNGMAFTGSLQHLYTAVLLQEVKHQLSGDEKRGVSSSS
LQEEQVEERGLQTSSDALPLAPAIQGSGEAASIPPVCAKSRSQNASLSISKAKKKKAKGL
FG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggatctggatcttctgctgcagccatggaggtccatcgcctttggaaactccaagttc
ttggctaagatttgtttcagtgagactggctatgcactgctgatatcagatctcactggg
gtgtggcatgaagaggtggatgccagtattgttcaagtcaggtccaaggaactaaacaaa
cgcctgaaagctcctgtctgctccttcctaaaacatttgtcggagctgctgcagcccttg
cttcttggaggccagactgatcatagctctgcctccttctcctgccagagaaatgatagc
aaacttaacattcatgtgaagagtgaactctctgacctacccttccattggggtttctac
tgtggggaggccagtggcagcctggtttcccgccatcttctgcagcctctgatgagaatg
aatcttgccttggaacatcagtcacagcaactgatggcactcttgttgcagaaggacttg
gaaattcaggactacagggagagtggagccatgctgagcagaggccgcctagagacggaa
gtgtttgatgagaaatgctttctggagaagtttctgtgtaagagtctcccagatgtatgt
agaggaggaaatgggatggcattcactggaagtctacagcatctgtacactgctgtcctg
ttacaggaagtcaaacaccagttatcaggtgatgagaagagaggagtaagttcttcatcc
cttcaggaagagcaggtcgaagagagaggcttgcagaccagctctgatgctctgcccctg
gcaccagccatacagggcagtggggaagctgcttcgattcctcctgtttgtgctaaatca
aggtctcagaatgcatcgcttagcatttccaaagcaaagaagaagaaagcaaagggttta
ttcggctaa
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