Geotrypetes seraphini (Gaboon caecilian): 117361862
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Entry
117361862 CDS
T09159
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117361862 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117361862 (NUP98)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117361862 (NUP98)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117361862 (NUP98)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117361862 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
117361862
NCBI-ProteinID:
XP_033803265
UniProt:
A0A6P8R5F2
LinkDB
All DBs
Position
6:4548647..4879558
Genome browser
AA seq
1759 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGATSTFGQSTAFGTTTAGSFGASAFGASNPSGSLFGNTQNKPG
GLFGASTFSQPATSSSTTGFGFGTSTGNTSSLFGTANTGGGGLFSSQSNAFAQNKTTGFG
NFGTSTSSGSLFGTTNTTSNPFGGTSGSLFGPASFAAVPTGTTIKFNPPTGTDTMVKAGV
STNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNTVGTGTATGLFGASAATSNTA
TGLFGSSTTNAGFSYGPNKTAFGTSTSGFGTNTGSLFGQPQPATTSLFSKPFGQPTTTQN
TGFSFGNTNTLGQPQTNTMGLFGATQPTQSGSIFGTATNTNTGSAFGTGASLFGQPNTGF
SGVGSTLFGSKPTGFGTSTTTAPSFGTATSGLFGIGTNTAGNSLFGNKPATGTLGTGFTT
GFGTALNTGQQSLFGNNQPKLGSTLGAGTFGTTGFNTAATGLNFGAPQAPVALTDPNAAA
AQHAVLQQQINTLAYSPFGDSPLFRNPISDPKKKEERLKPTNPAAQKALTTPTHYKLTPR
PATRVRPKALQTQGSAKAQLFDGLDDDEPALTNGAFMPKKSIKKLVLKNLNSSSLYSPDL
VSPPEYPENGECSSENHKHDEEEEEANEVTKFYTNPIAKPIPHTPENKHVNNVDDTIIAL
NMPSSLRNGLEGSSEDVSINDESLQDERDEELDNSYAPHPAGIVLTRVGYYTIPSLEELA
KMTDENCICIVKDFTIGRKGYGSIFFEGEVNLTNLNLDEIVHIRRKEVIVYLDDSQKPTV
GKGLNRRAEVTLDGVWPMDKTTRCLIKSPERLSEMSYESRLEAVSRKQGACFKEYRPETG
SWVFKVAHFSKYGLQDSDEEDEEQPSQVDAKKQKMAPVLPVGQQIQQPMVVATPPPQSPV
VEQLGRVVELDSDMADITQEQLLETTLEDDSTEEQEPISASSHIASSLGINPHTLQIMKA
SLFADEEDGDVTTSQHFSLFTGSSPKFLPPTPQIQRSRSSVGGLLQSRLLNGPLCPGSQQ
SSYSPKLLSSTPSWTASALLLPSSVPELPLKTVGTCRLQELVPLKKSVSFGHGKLLMDMA
LFMGRSFRVGWGPNWTLAHSGDQLSGSMQKEACRGSELMDYGFLPKPAIAKSLSESPFKI
HVEKLSLQEIIPGELQSYTAPLDIELKNSTVQTEQCCPLLVPNPGVAAIHDYADWVQDVC
QEPAEMETVVKHWCLVWTLCEAIWGHLKELEASLDEPSDYVQSLERRKAFSRWLSQTACE
RIEQEVAKSRHESHIEAVFSYLTGGRISEACRLAQQSGDHRLALLLSQQIGSQQVKDLLA
MQLVDWNKLQADRFIQEERMRIFTLMAGKPVWQLSDQRSVNVCTLLDWKRCVAVHLWYML
PPTVPIARALAMYEEAFQDSTERETYACAPLPRYLEDSGIDLSETLEAEEMAKRPLRDVC
FHLLKLYSNRHYDLYQLLDPSSITSDLLDYRLSWHLWMVLQALNYTHLSEQCQGVLHASY
AAQLENVGLWEWAIFVLLHITNAHVRENAVRELLNRHCGLCETADSQQKEAFLIQRLCIP
AQWIYEAKAIRARREGYRHKEALYLSKAGHWNRCHKLFIRHLAPDAIINENYEYLKGFLE
ELALPERSSLIQDWDTAGLLFLDYIRVLEMLNRIQQQDCSGYELERLHTKVTSLCNRIEL
IQCHNAKDRLAQSEMAKRVANILRVVLSFQHSPDSAPDVRVPLRLLAPHIGRLPMPEDYA
LEELRSLTRSYLQELTVSQ
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaagtcctttggtactccatttggaggaggtacaggtggttttggagctact
tcaacctttggccagagcactgcctttggcaccactacagcagggagctttggagcttct
gcttttggagcaagcaatcctagtggaagcctttttgggaatactcagaacaagccaggt
ggcctttttggggccagtacatttagccaaccagcaacttcctcttcaaccactggtttt
ggctttggcacatccactggtaacacaagcagcctgtttggtactgccaacactggaggt
ggtggactcttctcatcccaaagcaatgcctttgcacagaacaagacgactggttttgga
aattttggcacaagtaccagcagtggaagtctctttggaaccacgaacaccacctccaat
ccatttggggggacatctggctcactctttggacctgcaagttttgctgctgttccaaca
ggaactaccattaagtttaaccccccaacaggcacggacaccatggtgaaagctggcgtc
agcaccaacatcagcactaagcaccaatgtattactgccatgaaggagtatgaaagtaaa
tccctggaggagctgcgcttggaagactatcaggctaataggaaaggtcctcagaacacc
gtgggaacaggaacagctacgggactttttggtgcctctgcagccacttccaatacagcc
acaggattgttcggctcttccacaaccaatgctggcttctcatatggaccgaataaaacg
gcatttggaaccagtactagtggatttggaacaaacactgggagtctctttggccaaccc
cagccagcaactacaagcctatttagcaagccatttggacagcccacgactacacagaac
accgggttttctttcggcaacaccaacactttgggacagccacagactaataccatgggt
ttgtttggggcaactcagcccacacagtcagggagcatttttggaactgctacgaacaca
aacactggttctgcgtttggaactggagcaagcctctttggacaaccaaatacaggattt
agtggcgttggttcgactttgtttggtagcaaacctactggatttggaacttccacgaca
actgctccttcctttggtacagcaactagcgggctttttggtattggcacaaacactgct
ggcaatagtctctttggaaacaagcctgcaactgggactctaggaactggatttaccaca
ggatttggaacagctctcaacactgggcaacaatccctctttggtaataaccagcctaaa
ttaggaagcactttgggagctggaacatttggaaccactggattcaacacagcagcaact
ggtctgaactttggtgcaccccaggcccctgtggctttgacagatccaaatgctgcagca
gcacaacatgcagttcttcagcagcaaatcaatactctggcctattcgccctttggtgat
tctccactcttcagaaaccccatatctgacccaaagaaaaaggaagagcgactgaagccc
acaaatccagcagcacagaaggctctgacaactcctacgcactacaagctgacacctcgt
ccagccaccagagtgcggcccaaagccctgcagacccagggctcggccaaggcacagctc
tttgatggattggatgatgacgagcctgctcttaccaatggggctttcatgcccaagaaa
agcatcaagaagctagtgttaaaaaacctgaatagcagcagcctgtactcgccagacctg
gtttcccctccagaataccctgagaatggagaatgctcatcggagaatcacaaacatgat
gaagaggaggaggaagcaaatgaggtgaccaaattctacactaatcccatcgctaaaccc
atcccacatactccagaaaacaagcacgtgaacaatgtggatgatacaatcatagcatta
aacatgcccagtagcttgcgcaatggactagaaggaagcagtgaggatgtttcaatcaat
gatgaatccctgcaggatgagcgagatgaagagctagacaacagttatgctccacaccct
gcaggtattgttttgacacgagtgggctactacaccattccgtctttagaggagctggcc
aaaatgacagatgagaattgcatatgcattgttaaagacttcactattggacgtaaaggc
tatggatccatcttttttgaaggcgaggtgaatctgactaacctcaacctggatgaaatt
gtacacatccgcaggaaggaggttattgtctatttagatgacagccagaaaccaacagtt
ggaaagggcctaaataggcgagctgaagtaacgctggatggtgtttggccaatggataaa
accactcgttgcttgattaaaagtccagagcgactttcagagatgtcctatgaaagcaga
ctggaggccgtctctcgaaagcagggggcctgcttcaaagaataccgtcctgagacgggc
tcttgggtgttcaaggtagcacatttttcaaagtatggtctacaagattctgatgaggaa
gatgaagagcagccatcacaggtggatgcaaagaagcaaaaaatggcccctgtgctgcca
gtgggacaacagattcagcagccgatggttgttgcaaccccaccacctcagagcccagtg
gttgagcagttgggaagggtagtggaactggacagcgatatggcagatatcacccaggag
cagcttttggagaccacgttggaagacgatagcaccgaagaacaagagcctatatctgct
tcttcacacattgcttcatcactgggcataaatccacataccttacagataatgaaagca
tcgctctttgctgatgaagaggatggggatgttactacgagccagcacttcagtcttttc
acaggcagctctcctaagttcctgccccctacgccgcagatacagagatcccggtcatca
gttggaggattgcttcagtcaaggcttttgaatggacctctctgcccaggttctcagcag
tcttcctacagtcctaagcttctctcttccaccccttcctggactgcttctgcgctgctt
ctgcccagctcagttcctgagctcccattaaagactgtgggcacctgcagactacaagaa
cttgtgccactgaagaagtctgtgtcttttggccatggcaagctgctgatggatatggca
ctcttcatggggcgttcctttagagttggctggggacccaactggacactcgcacacagt
ggagatcagttgagcggatctatgcaaaaagaagcttgtcgggggtcagaattgatggat
tatggtttcttgccaaaaccggctattgctaaatcactgtctgaatcgccatttaagata
catgtggagaagctcagcctccaggaaattattcctggggaactgcaatcctacacggcg
cctctggatattgaactgaagaacagcacggtccagactgagcagtgctgccctctgctg
gtgccgaacccaggtgttgctgccattcatgactatgcagactgggttcaagatgtgtgc
caagaaccagcggaaatggaaactgtggtgaagcactggtgcttggtgtggactttgtgt
gaggccatctggggccacctgaaggaactggaagcaagcttagatgaaccaagcgactat
gttcagagcctggagcgcaggaaagcattttcacgctggctttcacagactgcatgcgag
cgcattgaacaggaagttgcaaaatctcgtcatgagagccacatagaggctgtgttcagt
tatctcaccgggggaaggatcagtgaggcatgcaggctggcacaacaatcaggtgatcac
agactggccctgctgctgtcccaacagataggcagccagcaggttaaggacctgctggct
atgcagttggtggattggaataagctgcaggctgaccgctttatccaggaagagagaatg
cgtatctttacgctgatggctggcaaaccggtgtggcagctctcagaccagagaagtgtc
aatgtttgcacgctgctggactggaagcgctgtgtagcggttcatctttggtacatgctc
ccaccaactgtacctatcgctagggccctcgcaatgtatgaagaagcatttcaggactcc
acagagcgtgagacatacgcttgtgctcccttgcctcgatatttagaagattctggaatt
gatttgtcggaaacattggaggcagaagagatggcaaagagacccctacgagatgtttgc
tttcatcttttgaaactgtacagcaacagacattatgacctctatcagctgcttgacccc
agtagcataacctctgaccttttggactatcgtctcagttggcatctgtggatggtgctt
caggccttgaattacactcatctgtctgagcagtgccagggggtgctgcatgccagttat
gctgcccagctggagaatgtgggattgtgggaatgggctatctttgtcctcctccacatc
acaaatgcccatgtgcgtgaaaatgctgtccgagagctgctaaaccgccactgtggcctc
tgtgaaactgcagactcccaacagaaggaggcctttcttattcagagactttgcatccca
gctcagtggatttatgaagccaaggccatccgagcaagaagggaaggatataggcacaaa
gaggctctttatttgtccaaagccggccactggaatcggtgccacaagctgttcatcagg
cacctagctccagatgcgattatcaatgagaattatgagtacctaaagggtttcttggag
gagctggccttacctgagcgcagcagccttatccaggactgggacacagctgggctgctt
ttcctagactacattcgggtccttgagatgttgaatcggattcagcagcaggattgttcg
gggtacgagctggaaaggctacacaccaaggtgacatccctttgcaaccggatagaactg
atacagtgccacaatgccaaggatcgtctggctcagtctgaaatggccaaacgtgtcgcc
aacatcctgcgtgtggtcttgagcttccagcattctccagattctgccccagacgtccgt
gtgccattgcgtctgcttgccccgcatattggccggcttcccatgccggaggactatgcc
ttggaggaactccgcagtctgacaagatcctacttacaggagctcactgttagccagtga
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