Geotrypetes seraphini (Gaboon caecilian): 117361871
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Entry
117361871 CDS
T09159
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
117361871 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
Other domain-containing proteins
Patched domain-containing proteins
117361871 (PTCHD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
117361871
NCBI-ProteinID:
XP_033803286
UniProt:
A0A6P8RJC3
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All DBs
Position
6:complement(238403749..238507066)
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AA seq
887 aa
AA seq
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MLRQVLHRGLRTSFSRLGYFIASHPVFFASAPVLVAILLGASFSRYGVEENVEYLLAPKH
SLAKIERNLVDSLFPVNRSKHRLYSDLQTPGRYGRVIITSLRRANMLDQRHTELILKLHS
AVTRIQVQRPGFNYTFAHICILNNDKTCVVDDIVHILEELKTARSLNRTNFILTYPITQL
KDGREVYNGHQLGGVTVHSKDRVKSAEAIQITYYLQAINPLNDLIAEKWESIFCETVERF
QRLNREVKMYSFTSSSLGEDFQKTSRVSEQYLITSLILVVMLAVLCCSMQDCVRSKPWLG
ILGVVTVSLATLTAAGIVNLTGGKYNSTFLGIPFIMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVYADSMISFSLTTAMYLVTFGIGASPFTNIEATRIFCRNCCIAIFFNYLYTISF
YGSSLVVTGYIENNYRHSIFCRKVPKPEILQEKPIWYKFLMTAKFNEDTDAEEINSYESH
LFLCFLKRYYCDWITNTYVKPFVVLFYLVYVSFALMGYLQVNEGSDLSNILATETRTITY
TTAQQKYFSNYSPVIGFYIYESIEYWNSSVQEDVLQYSKGFVRISWFESYLNYLRKLNMS
TGLPKKNFTDILRYSFLKIPRYSHFSEDIIIPKKYNNDVEVVASRMFMVAKTMDTRKEEL
YSLLETLRRLSLKSKVKFIIFNPSFVYIDRYASSVGAPLQNSCISALFLLVFSAFLVTSS
LINVWITLTVASVEFGVIGFMTLWNVELDCISVLCLIYGINYTIDNCAPLISTFILGKEF
SRTKWVKNALELHGVAILQSYLCYTVGLIPLAAVPSNLTRTLFRCLFLIAFVTFFHCFAI
LPVILTFLPPSKKKRKEKKHPENREEIECVEMVDMDSTRVVDQITTV
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcaggtcttgcacagggggctgaggacgtctttctccagactcggctacttc
atcgccagccaccctgtcttcttcgcctccgcccccgtccttgtagccattttgctgggg
gccagcttcagcaggtacggggtcgaagagaatgtggaatacctgctggccccaaagcac
agcctggccaagatcgagagaaacctggtggatagtctgttcccagtcaaccgctccaag
caccggctttattccgacctgcagaccccggggaggtacggcagggtcatcatcacctcc
ttgaggagagccaacatgctggaccagcgtcataccgagctgatcctaaagttacactct
gctgtgaccaggattcaagtacaaaggcctggtttcaattacacttttgcccatatctgc
attttgaataacgataagacttgtgtagtggatgatatagtgcacattctggaggaatta
aagactgcacgctccttaaatcgaaccaattttatactcacatatcccatcacacagtta
aaggatggcagggaagtatacaatggtcaccagcttggtggtgtcactgttcacagcaaa
gaccgggtcaaatccgccgaagccattcagatcacctactaccttcaggccatcaaccct
ctgaatgatttgatagcagagaagtgggagtccatcttctgtgagacagtggaacgtttc
cagagattgaacagggaagtcaaaatgtattcctttacctcttcttcattaggggaggat
tttcagaagaccagcagagtgtccgaacaatatctgatcacgagcctcatcctcgtggtt
atgctggccgtactctgctgttccatgcaggactgtgtccgcagcaaaccttggcttggc
atccttggagtggtgacagtgagcttggccacactgacagcggctgggattgtcaatttg
actggcggaaaatacaactccaccttcctgggaattccttttataatgctaggtcatggg
ttatatgggacttttgaaatgttgtcctcctggaggaaaacaagagaagatcagcatgtc
aaagagagaactgcagctgtgtatgcagattccatgatctcattttcccttaccactgcc
atgtatctggtaacttttgggataggtgccagccccttcactaacatagaagcaacaagg
attttctgccgcaattgctgtatagcaattttcttcaactacctctacacaatttccttt
tatggatccagcctggtggttactggttatatagagaacaattaccggcacagtatcttc
tgcagaaaggtgccaaagcctgagatcctgcaagagaagccgatatggtataaattcctt
atgacagccaagttcaatgaagacaccgacgcagaggagataaactcttatgagagtcat
cttttcctttgtttcctcaagcgctactactgtgactggataacaaacacgtacgtcaag
ccttttgtagttctcttttacctagtatatgtttcatttgccttaatgggctacttgcag
gtcaatgaagggtcagacctcagtaacattttagcaaccgagacacgaaccattacatac
acaactgcacagcaaaagtattttagtaactatagtccagtcattggcttttacatctat
gagtctatagaatactggaactcaagtgttcaggaagatgtgctacagtacagcaagggg
tttgtgaggatatcatggtttgaaagctatttgaattaccttagaaagcttaatatgtcc
actggactgcccaaaaagaattttactgatatcttaaggtattctttcttgaaaatacca
cggtactctcatttctcagaggacatcatcattcctaagaaatacaataatgacgtggag
gtggtagcctctaggatgttcatggttgctaagacaatggatacaagaaaggaagaactc
tatagtctcttggaaacattaaggagattgtccctcaagtccaaggtgaaattcatcatt
ttcaacccatcttttgtatacattgatcggtacgcttcctcagtgggagccccactacag
aactcctgcatcagtgctttatttctcttggttttttctgcatttcttgtgacaagctct
ttaattaatgtctggatcacccttactgttgcctcagttgagtttggggtcataggtttt
atgactctgtggaacgtagagctggactgcatatctgttctgtgtttaatttatggaata
aactacacaatagacaactgtgcaccactaatatcaacttttattttgggaaaagaattt
tcaaggactaaatgggtaaaaaatgctctagaactgcacggagtagctattttgcagagc
tacctgtgctacactgttggtttaattcctcttgcagctgtgccttcaaatctgacccgt
acactgttcaggtgcttgtttttaatagcatttgtcacattctttcactgctttgccatt
ttacctgtgatattgacttttttaccaccctccaagaaaaagaggaaagaaaaaaagcat
ccagaaaaccgtgaggagattgagtgtgttgaaatggtagacatggatagtacccgagtg
gttgatcaaattacaactgtctga
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