Geotrypetes seraphini (Gaboon caecilian): 117361902
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Entry
117361902 CDS
T09159
Symbol
ZBED1
Name
(RefSeq) zinc finger BED domain-containing protein 1 isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117361902 (ZBED1)
04121 Ubiquitin system [BR:
gsh04121
]
117361902 (ZBED1)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
117361902 (ZBED1)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117361902 (ZBED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
PRRSV-NSP11_N
Motif
Other DBs
NCBI-GeneID:
117361902
NCBI-ProteinID:
XP_033803359
UniProt:
A0A6P8R5Q1
LinkDB
All DBs
Position
6:225674761..226079442
Genome browser
AA seq
695 aa
AA seq
DB search
MENKSSESFQSDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPDEFCEFVKSNTEQMREAFATAFSKLKPESSQQVVQETFIMKTSHSYEN
KKHQELTSAVISFICEGMYPASIVDEPTFKALLKTADPRYELPSRKFFCTKAIPEKYNVV
REIILKELTDILWCGISTDMWRSENQNRLYVTLSAHFLNNGASNYLSVNSRCLKTFEVPE
ENTAETITRVLYEVFIEWGLNTKVFGATTDYSKDIVKACSLLDIPVDMPCLGQTFNAGIQ
EAFQLPKLCGLLARCRRLVEYFQQSTVAMYMLNEKQKQQTLLPCMLISDRVSWWGSTLAM
LLRLKEQQFVIAAVLVEDSNNHHLMLESSEWNTIEGLVDLLQPFKQVAEMMSTSKYPTIS
MVKPLLHMLLNTTLNIKETDLKEISMAKEVIAKELSTTYQQTPEIDMFLNVATFLDPRYK
KLPFLSAFERTQVENRVVEEAKSLLERGKDNSFRPDEKGFSISEEPPLKKMVISSTPPPT
SSINNMLAEIFCQTGTSEDQEEWHAQIIEELSNFKSQKVLGLNEDPLKWWSDRLALFPVL
PKVLQKYWCILATRVFPERLFSSSANVVSAKRNRLAPAHVDEQIFLYENTRNSSEQEPED
EDEGEWGLQQEHIFNLNDSVNVSNSFFTIRDSGFI
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaaaagctcagagagttttcagtcagaccttaaactagttgctcatcccaga
gcaaaaagtaaagtgtggaaatactttgggtttgacaccaatgctgaaggatgcatatta
cagtggaagaagatctattgtcgcatctgtatggctcagattgcctattctgggaatact
tccaacctttcataccatcttgagaaaaaccacccagatgagttctgtgagtttgtgaaa
agtaacactgaacagatgagggaagcctttgctaccgcattttcaaagctgaagccagaa
tcttcacagcaggttgtccaggaaactttcattatgaaaaccagccatagctatgaaaac
aaaaaacaccaagaactgacatctgcagtaatcagctttatttgtgagggcatgtatcct
gcctccattgtggacgaacctacatttaaagcactcttgaaaacagctgatcccaggtat
gagcttccaagcagaaaattcttctgtactaaggcaatacctgaaaagtacaatgtggtt
cgagagattatattaaaggagcttactgacattttatggtgtggaatttctacagatatg
tggagaagtgaaaatcagaacaggctatatgtgaccctttcagctcatttcctaaacaat
ggcgcttctaactacctgtctgtgaactcacgatgtttaaaaacatttgaagtgccagag
gaaaatactgcagagactattacccgagttctttatgaggtcttcattgaatggggactt
aatacaaaagtctttggtgctacaacagactacagtaaagacattgtaaaagcttgctct
ctcttggatattccagtggatatgccttgtctgggacagacttttaatgctggaatacaa
gaagctttccagcttccaaaactctgtgggcttcttgccaggtgcaggaggttagttgaa
tattttcagcaatccacagtggcaatgtacatgttaaatgagaaacagaagcagcagact
ctgttgccttgcatgctgataagcgaccgtgtttcctggtggggtagtacacttgcaatg
ctactgcgtcttaaggagcaacagtttgtgattgcagctgttctggttgaagacagcaat
aaccatcacctaatgttagaatcgagtgagtggaatactattgaaggtttggtggacttg
ctgcagccatttaaacaggtagcagaaatgatgtcaacttcaaagtatcccactataagt
atggtgaaaccccttcttcacatgctgctcaatactactttgaacattaaggaaactgat
ttgaaagaaataagcatggccaaggaagtgatagccaaagagttatctacaacctaccag
cagacacctgagatagacatgtttcttaatgttgcaacctttctggatcctaggtacaaa
aaacttcctttcctttctgcatttgaacgcacacaggttgagaacagagtggtggaggaa
gcaaaaagccttttagagagaggaaaggataactctttcagacctgatgaaaaaggcttt
tcgatttcagaagagccgccacttaaaaaaatggtcatctcttccacccctcccccaacc
agcagcattaacaacatgcttgcggaaatcttctgccagactgggacctcggaagaccaa
gaggagtggcatgctcagatcattgaggaactgagcaattttaagtcgcaaaaagtcctt
ggtctgaatgaggacccactgaaatggtggtctgaccgactggcattattccctgtatta
ccaaaggtacttcagaaatactggtgcattctggccaccagggtcttccccgaacggctt
tttagttcatctgctaatgttgtgagtgctaagaggaatcgattggctccagcacatgta
gatgaacagatctttttgtatgaaaacactcgaaatagttctgaacaagaacccgaagat
gaggatgaaggggagtggggcttacaacaggaacacatttttaatttaaatgattcagtt
aatgtgagcaacagttttttcactataagggacagtgggttcatttaa
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