Geotrypetes seraphini (Gaboon caecilian): 117362067
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Entry
117362067 CDS
T09159
Symbol
CYFIP1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04810
Regulation of actin cytoskeleton
gsh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117362067 (CYFIP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117362067 (CYFIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117362067 (CYFIP1)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117362067 (CYFIP1)
Factors involved in mRNA localization
Other mRNA localization factors
117362067 (CYFIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
LRIF1
Motif
Other DBs
NCBI-GeneID:
117362067
NCBI-ProteinID:
XP_033803712
UniProt:
A0A6P8R0C5
LinkDB
All DBs
Position
6:3649520..3788223
Genome browser
AA seq
1257 aa
AA seq
DB search
MSAIMTTQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGI
ARYIEQATVHSSMNEMLEDGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLE
PEVTKLMNFMYFQRNATERFCAEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKN
MKCSVKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVISGYEE
LLADIVNICVDYYENKMYLTPGEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLTKID
KFFKQLQVVPLFGDMQIELARYIKTSAHYEDNKSRWTCTSSSSSPQYNICEQMIQIREDH
MRFISELARYSNSEVVTGSGRQDAQKSDAEYRKLFDLSLQGLQLLSQWSAHVMEVYSWKL
VHPTDKYSNKDCPDNAEEYERATRYNYSSEEKFALVEVIAMIKGLQVLMGRMESVFNHAI
RHTIYAALQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWEAGHEPFNDPALKGE
KDPKTGFDIKVPRRAVGPSSTQLYMMRTMLESLVADKSGSKKTLRSSLEGPTIMDIEKFH
RESFFYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIDMSMPWILTDHILETK
EASMMEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKI
MAGGLLLDKRLRAECKNHGANIPLPPSNRYGTLMKQRHVQLLGRSIDLNRLITQRISAAM
YKSLELALGRFESEDLTSIVELDGLMEVNRMAHKLLRTFLTLDDFDAMFREANHNVSAPY
GRITLHVFWELNYDFLPNYCYNGSTYRFVRTVLPFSQEFQRDKPPNAQPQYLYGSKALNL
AYSSIYSNYRNFVGPPHFKALCRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVM
PKICRLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLLIEQNLSL
EEVCDLLHAAPFQNIFPRVHVKETERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAR
EGDLLTKERLCCGLSMFEVILTRIQNFLDDPVWRGSLPSNGVMHVDECVEFHRLWSAMQF
VYCIPVGAHEFTVEQCFGDGLHWAGCMIIVLLSQHRRFDVLDFCYHLLKVQKHDGKDEII
KNVPLKKMVERIRKFQILNDEIFTILDKYLKSSEGENTPVEHVRCFQPPIHQSLTSN
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccataatgactacgcaagtgaccttggaggatgctttatccaatgtggacctt
ttggaggaattacctttgccagaccagcagccgtgtattgaaccccctccatcttcctta
ctttaccaaccaaactttaatactaactttgaagacagaaatgcgtttgtcacaggcatc
gccagatacattgaacaagccactgtccactctagcatgaatgaaatgttggaagatggc
caggaatatgctgtcatgctgtacacatggagaagctgctcaagggcaattcctcaggtc
aaatgtaacgaacagcccaacagggtggaaatttatgagaagacagtggaggttctggaa
cccgaggttacaaagctgatgaatttcatgtactttcagagaaatgccactgagcggttc
tgtgctgaagtgagacgtttgtgccacgcagagagaaggaaggactttgtttctgaagcc
tacctacttactctgggaaagttcatcaacatgtttgcagtactagatgagctaaaaaat
atgaagtgtagtgtgaaaaatgaccactctgcatacaagcgagcggctcagtttttgagg
aaaatggctgatcctcagtccatccaagaatctcagaacctctccatgttccttgctaac
cacaataagataacacagtctttgcagcagcagctggaagtgatttctggttatgaagag
ctccttgcagacattgtaaatatatgcgtggactactatgaaaacaagatgtatctaacc
cctggtgaaaagcacatgctcttaaaagtaatgggttttggcctgtatctaatggatgga
aatgtcagtaacatctacaaattggatgctaagaagaggataaatcttactaagatagat
aaattcttcaagcaactgcaagtggtccccctctttggtgacatgcaaattgaattagca
agatacattaagaccagtgcccactatgaagacaataaatccaggtggacatgtacctcc
tccagcagcagtccccagtacaacatttgtgaacagatgatccagatcagggaggaccac
atgcgcttcatttcagagctggctcgttacagtaacagtgaggttgttacaggatctggt
cgtcaggatgctcagaaaagtgatgcagaatatcgaaaactgtttgatttgtctcttcag
ggcctgcagcttctgtcccagtggagtgctcatgtcatggaagtgtattcgtggaagctt
gtgcatccaactgacaagtactccaacaaagactgtccagacaatgctgaagaatatgaa
cgagcaacacgatacaattattctagtgaagagaagtttgcgctcgtggaggttattgcc
atgatcaaagggctccaggtgctaatgggtaggatggaaagtgttttcaaccatgcaatc
cgacataccatttatgctgctctgcaagactttgcccaggtcacactcagagaaccatta
agacaagctatcaagaagaagaagaacgtcattcagagtgttctccaagctattagaaag
acagtttgtgactgggaggcaggtcatgaaccatttaatgaccccgcactcaaaggagaa
aaagatcccaagactggctttgacatcaaagtccctagacgagcagtgggaccctccagt
acccagctctacatgatgagaactatgttagaatcccttgttgctgacaaaagtggttcc
aagaaaaccttgcgaagtagcctcgaggggccgaccataatggatatagaaaaatttcac
cgtgaatctttcttctacacgcatttgataaacttcagtgaaaccctccagcaatgctgc
gacctgtcacagctgtggttcagggaatttttcttggagttgactatgggcagaagaatt
cagttccctattgacatgtcaatgccgtggattttgacggaccacatcttagaaaccaaa
gaagcatcaatgatggagtatgttctctattccttggatctttacaatgacagtgcacat
tatgcactgacaaagttcaagaaacagtttctttatgatgaaattgaagctgaggtgaat
ttatgctttgatcaatttgtctacaagttagctgaccaaatatttgcatattataagatc
atggcaggaggtctgcttttagataaacgattgcgtgcagagtgcaaaaaccatggagca
aacattcctctgcctccctccaaccggtatggaacgctaatgaaacagaggcacgtgcag
cttctaggtaggtccatagacctcaatcgcttgattactcagaggatttcagcagctatg
tacaaatccctagagctggcacttggtcgttttgaaagtgaagacctgacctctattgtg
gagttagatgggctgatggaagttaacaggatggctcataaactgctgaggacgttctta
actttggatgactttgatgccatgttccgagaagccaatcataatgtgtcagcaccatac
ggaagaatcactcttcatgtcttctgggagctcaactatgatttccttccaaactattgc
tacaatgggtccacttacagatttgttcgaacagtgctgccgttttcacaggagtttcag
agggataagcctcctaatgcgcagccacaatatttgtatggatcaaaggctttgaatttg
gcctacagcagcatatacagcaattaccggaactttgttgggccaccccattttaaagct
ctctgccgtctccttggctatcagggtattgctgtggtgatggaagaattactgaaagtt
gtgaagagcttgttgcaaggcacaattctccagtatgtgaaaaccttgatggaagtgatg
cctaaaatttgccggttgccaagacatgagtatggctctccaggtattcttgaatttttc
catcatcagctgaaggatattgtagagtatgctgaactaaagactgtgtgttttcaaaac
ttgcgggaagtgggcaatgctattcttttctgtcttctcattgagcagaatttgtcactg
gaagaagtctgtgatctgttgcatgctgcgccgttccagaacatcttcccaagagtgcat
gtcaaggagactgaaagacttgatgctaaaatgaagagactagaatcaaaatatgctcca
ctgcaccttgttcctttgattgaaagactggggaccccccagcaaattgcaattgcaaga
gaaggagacttgctgaccaaggaacgtctgtgctgtggcttatctatgtttgaagtgatc
ctgaccaggattcagaattttctagatgacccagtgtggcgtggatctctccctagcaat
ggtgtgatgcacgtggatgagtgcgtagagtttcacaggctctggagtgcaatgcagttt
gtatactgcattcccgtgggcgcacatgaatttactgtagaacagtgctttggagatggc
ttacactgggctggttgcatgattattgtgcttttgagccagcatcgtcgatttgatgtc
ctggatttctgctaccatttactaaaagtccagaaacatgatgggaaagatgagatcatt
aagaatgtgcctttgaagaaaatggttgagagaattcgtaagttccaaatcctgaatgat
gagatatttaccattttagacaagtacttgaagtctagtgaaggagagaatacaccagtg
gaacacgttcgctgttttcagcctcccatccatcagtccctgaccagcaactaa
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