Geotrypetes seraphini (Gaboon caecilian): 117362128
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Entry
117362128 CDS
T09159
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117362128 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117362128 (EXOSC8)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117362128 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117362128
NCBI-ProteinID:
XP_033803884
UniProt:
A0A6P8R1V3
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Position
6:55597049..55653039
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AA seq
276 aa
AA seq
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MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRPTTVNIGSITTADGSCLVKLGSTTILC
GIKAEFSAPPADAPNKGYIVPNVDLPPLCSSRFRPGPPGEEAQVASQFIADVIENSQIVL
KEDLCITNGKLAWVLFCDIICLDYDGNILDACTYALLGALKNVRLPSVKINEETGLAEVC
VKEKRPLKIRKNPVATSFAIFDDTLLIVDPTTEEETLATGTITIVMDEDDRLCVLRKPGG
SAMSAEKLQACISRAITRHKEVRKLLDEVIESIKPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggcttcaaaactgtggaacccttggaatattataggaggtttttgaaagag
aactgtcggcctgatggacgggaactgggagaattcagacccaccacagtaaacatcggt
tcaatcacaactgcggacggctcttgtctagtgaagcttggaagtaccaccattctttgc
ggcattaaagcggagttttcagcacccccagcagatgcacccaataaaggctatatcgtt
cctaatgtggatttaccacctctgtgttcgtcaagatttcgtcctggccctcctggagaa
gaggcacaagtggccagtcagttcattgcagatgtgattgaaaattcacagattgttttg
aaagaagacttgtgcattacaaatggcaagcttgcctgggttctgttctgtgatatcata
tgtcttgattatgatgggaacattctggatgcctgtacatatgccttgctgggggcctta
aagaatgtacgattgccatcggtcaagataaatgaagaaactggtttagcagaagtctgt
gtgaaagagaagaggccgttgaaaattagaaagaatccagttgctacatcatttgctata
ttcgatgatacattattgattgtggaccccactacagaagaggagacactggcaactgga
acaataaccattgtaatggatgaagatgacagactctgtgttctacggaaaccaggtgga
agtgccatgtcagcagaaaaacttcaggcctgcattagtcgagcaataacaagacacaag
gaagtgaggaagctcctggatgaagtgatagaaagcataaagccaaaataa
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