Geotrypetes seraphini (Gaboon caecilian): 117362129
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Entry
117362129 CDS
T09159
Symbol
CNTN5
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-5
KO
K06761
contactin 3/4/5/6
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gsh04515
]
117362129 (CNTN5)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gsh00537
]
117362129 (CNTN5)
Cell adhesion molecules [BR:
gsh04515
]
Immunoglobulin superfamily
Contactins
117362129 (CNTN5)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gsh00537
]
Others
117362129 (CNTN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Tissue_fac
C2-set
Motif
Other DBs
NCBI-GeneID:
117362129
NCBI-ProteinID:
XP_033803886
UniProt:
A0A6P8RJP3
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All DBs
Position
6:30705902..32166628
Genome browser
AA seq
1103 aa
AA seq
DB search
MRSSWKLFLFLSVTGCLSEYSAAVPGQPISHAAVLRIKPGTSSSAQFNSRSRPRFSNPSL
GAISLLTPSWRDTAQHYQSPTNLYHFSEAFRQEESIEYGPVFLQEPDDVIFPTDTNEKKV
VLSCEAQGNPVPSYRWLHNGTEINMENNYRYSLIEGNFIILSPLEEKDSGRYQCITYNTF
GTILSREASLQFAYLENFSGRARSAVSVREGQGVVLMCSPPPHSPEITYSWVFNEFPSFV
AEDSRRFISQETGNLYISKAQASDVGSYICLVKNTMTNARVMSPPTPLTLRDDGVMGEYE
PKIEVHFPYTVTAAKGTTVKMECFALGNPVPTISWRKISGFIPNKSRLRKSQAVLEIPTV
QLEDAGTYECKAENSRGKNAFRGQLQVYTRPHWVERINNTQLDSGELLRWECKASGKPRP
THRWLRNGIPLQPQSRVEMINGVLMIHNVNQSDSGMYQCLAENIHGVIYGSAELKVLASA
PVFEQEELKKTIVITKGQEVITECKPYASPKPIISWKKGDKAVRQNKRINILPDGSLRIL
NASKSDEGKYTCQGVNAFGSAEIVTSVFVKEPTRIELTPKRTELTVGESIVLSCKAIHDT
MLDVTFYWTFNGQPVDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSV
ADEAELLVRGPPGSPGVVIVEEITESTATLSWSPGADNHSPITSYNLQARSPFSLGWQTV
KTVPETIGGDLESATAVDLSPWVEYEFRVVASNSIGTGDPSAPSRVIRTSEAVPKTAPAN
VSGGSGSGRRNELVITWEPVSEEFQNGEGFGYIVAFRPNGTRGWKEKMVTSSDASKFIYR
DESAPPLTPFEVKVGVYNNKGDXPFSSIVVICSSEGEPSSVPADVKAISLSASEILVAWK
PVKESLGRPQGFEVSYWKDMEQEETTEKVKTEGNESSIILSGLEGNALYHITVRAYNNAG
YGPPSSTARVSTKKSPPSQPPSNVMWMQDGSQVSLAWEPVRSLANESDVMGYKVLYRQEG
HSSSQVIETQKTSAEVHLPDVGVYIIEVRACSEGGDGTASSQIRVPSFTGGKITNAQTTI
HMFSTSSSSVTLLLALIVPSTSW
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgtcatggaaactattcctattcctgtcagtcactgggtgtctttcagaatac
tctgctgctgttcctggccagcctatttcacatgccgctgtcttaagaattaagcctggc
acttcatcttcagcacagtttaattcaaggagccgaccacgattcagtaacccttcatta
ggagcaatcagtctccttactccgagttggcgagatacagcacagcattaccagtctcca
acaaacctatatcatttctcagaggcctttaggcaagaagagagcatagaatatggacca
gtgtttcttcaggagccagatgatgtgatttttccgactgatactaatgagaagaaggtg
gtcctcagttgtgaagcacaaggaaatcctgttcccagttatagatggctgcacaatgga
acagaaataaacatggaaaataattatcggtacagtctgatagaaggaaattttattatc
ctcagtccacttgaagagaaggattcaggtcgatatcagtgcataacctataataccttt
ggcactatactcagtcgagaagcctcacttcagtttgcatatctggaaaatttcagtggc
cgagcaagaagtgcagtctctgtgagagaaggacaaggggttgttctgatgtgctctcct
ccacctcattcaccagagattacctatagttgggtttttaacgagttcccatcctttgtg
gcagaagatagccgacgctttatctcgcaggaaacaggaaacctctacatctccaaggca
caggcatctgatgtaggcagctatatctgcctggtaaaaaacacaatgacaaatgcaaga
gttatgagtccgccaacgccactcaccctgcgcgatgatggtgtgatgggagaatatgaa
ccgaaaattgaggtccattttccttacactgttacagctgctaagggaacaactgttaag
atggagtgttttgcacttggcaacccagttccaacaatatcatggaggaaaattagtggc
tttattcctaacaaatcacgtctaagaaaatcccaagctgtgcttgaaatccctactgtg
caactagaagatgcaggaacttatgaatgcaaagctgagaattcacggggaaagaatgcc
ttccgaggacaacttcaggtgtacactcgaccacattgggttgaaagaattaataacacc
caattagacagtggagaactgctgaggtgggaatgcaaagctagtgggaaaccaagaccc
acccatcgttggttaaggaatggaataccactccagccacagagcagggtggagatgatt
aatggtgtcttgatgatacacaatgtgaatcagtcagattctggaatgtaccaatgcttg
gcagaaaatattcacggagttatttatgggagtgcagagctcaaggttctagcttcggct
cctgtttttgaacaggaagaactaaagaaaacaatagttatcaccaagggtcaagaagta
attacagagtgcaaaccatatgcctctccaaaaccgatcatctcatggaaaaaaggcgat
aaagctgtacgacagaataagaggataaatatccttccagatgggagtttgagaatcttg
aatgcttctaaatcagatgaggggaaatacacatgtcaaggagtgaatgcatttggttca
gcagaaattgtaacttcagtatttgtcaaagaaccaacaagaattgaacttactccaaag
aggacagagttaactgttggcgagagtattgtcctgagctgcaaagcaatccatgatacc
atgctcgatgtgactttctattggactttcaatggacaaccagttgactttgaaaaagaa
ggcggacattttgaaagcatcagggcacaagcatcctctgcagatttaatgatcaggaac
atccttctgatgcatgctgggagatatggctgcagggtacagaccacggcagacagtgtg
gcagatgaggcagagcttcttgttagaggcccacctgggtcccctggcgtggtgatagtg
gaggaaattacagaaagcacagccaccctctcctggagccctggggctgacaatcacagt
cctatcacctcctacaacttgcaagcccgcagtccattttcacttggttggcagactgtt
aaaacagtgccggagactattggtggagatttggagtctgcaacagcagttgatctcagc
ccatgggtagaatatgaattcagagttgttgcatccaattctattggcactggagatcca
agtgcgccatcccgagtgatcagaaccagcgaagcggttccaaagacagcgccagcaaat
gtaagtggtggaagtggaagcggaagacgcaatgaattagtgataacgtgggagccagta
tcagaagagttccagaatggggaaggatttggatatatagtggctttcagacccaacggg
actcgaggttggaaggaaaaaatggtgacttcttccgatgcgtccaaattcatttacaga
gatgaaagtgcacctcctcttactccttttgaagtgaaggtcggcgtatacaataacaaa
ggtgatnggcccttcagctctattgtagtcatctgttcttctgaaggagaacccagtagt
gttcctgcagatgtcaaggctataagtttgtctgcatcagagattctagttgcatggaaa
cctgttaaagaaagcctgggaaggccgcaaggatttgaggttagttactggaaagatatg
gaacaagaagaaaccacagaaaaagtgaaaacagaaggaaatgagtcgtccatcatcttg
tcgggtttggaaggaaacgcgttgtaccacataacggtcagggcatacaataatgcagga
tatgggccacctagcagcacagctcgggtcagcacaaagaaatcccctcctagtcaacct
ccaagcaacgttatgtggatgcaagatggatcccaggtgtctctggcatgggagcctgtc
cgatctttagcaaatgaatcagatgttatgggctataaggttttgtacaggcaagaaggt
catagcagcagccaagtcatagaaactcagaaaacctcagcagaggtccatcttccggat
gtcggggtatatatcattgaagttcgagcatgcagtgaaggtggggatggaacagcgagc
tcccaaataagagtaccgtcttttacaggtgggaaaatcacaaacgcccaaacaactata
cacatgttttcaacttcctcatcctctgtaacattgcttttggcactaatagttccgtca
acttcctggtga
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