KEGG   Geotrypetes seraphini (Gaboon caecilian): 117362180
Entry
117362180         CDS       T09159                                 
Name
(RefSeq) putative short transient receptor potential channel 2-like protein isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117362180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gsh03400]
    117362180
DNA repair and recombination proteins [BR:gsh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     117362180
SSDB
Motif
Pfam: XRCC1_N zf-H2C2_2 FYVE FdhE_central
Other DBs
NCBI-GeneID: 117362180
NCBI-ProteinID: XP_033804028
UniProt: A0A6P8RH86
LinkDB
Position
6:complement(5616807..5648727)
AA seq 445 aa
MAPIKLRHVVSFSSQDPRYPVENLLRDSGVLPWLSCPRDRSRQLRVELQLEQASLFGYVD
IVICPDFSGNCGSALLQIDVGRSSWPPDRPYVTLLPATTLMTPANCKLGENRTSVRMFKE
GDFLPASLSEKWDRVRITCSQPFHKHSQFGLSFLRFRTPLDEEKNEMTEGQRMSENETLH
RESDTTPWLSNPSVRRTFFPETQTSAVEETLKSRLQQLDPGSAPHIGNSVCLSRTARMVI
LAARSRRLIFPPGGSRSVEERKYPQEEDRGASVSHSESGSCPESSGAPPMKKVQQMPSSK
RKARQESNRGRFVSRTSPGGLRQRTRGGKGQKGQNGISQMRSTAVESGPRRGEEAGSCPI
CGGSFQLDFLPLHASRCGEVVDLEESSSSSEEALHSGGISFSHTEESPWVSCPLCGFRYS
ASVIEQHASRCGEQESSGTSSPWVE
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggctccaattaaacttcgacatgttgtgtccttcagctctcaggatcccaggtatcca
gtggagaatctgctgagggacagcggtgtcctgccatggctgagctgccctcgggaccga
agtcggcagctgcgtgtggagctgcagctggaacaagccagtctctttggatatgttgat
atagtaatctgtcccgatttctcagggaactgtggctcagccctgcttcagatcgatgtg
gggcgctcctcctggcccccggacagaccttacgtcaccctgctccctgcaaccacattg
atgacgccagccaactgcaaattgggtgagaaccgcaccagcgttcggatgtttaaagaa
ggagactttctgcctgcatctttgagtgagaaatgggatcgggtccggattacctgcagc
cagccattccacaagcactcccagtttgggctctcttttctgcgattccgcaccccactg
gatgaggagaagaatgagatgacagagggccagagaatgagtgagaatgaaacgttgcac
agggagtctgacaccactccatggctctccaatccgtctgtacgtaggacattcttccca
gaaacccagacgagtgctgtggaagaaacactgaagagcaggctgcagcagctagaccca
ggttctgcaccccacatagggaacagtgtgtgtctaagtcgcactgcacgcatggtgatc
ttggctgctcggtcccgcaggcttattttcccaccagggggtagtagaagtgtggaggaa
aggaaatatccccaggaggaggacagaggggcatcggtgagccattctgagtcaggctcc
tgtcccgagtcctctggggctccacccatgaagaaagtccagcagatgccgagtagcaag
aggaaagcgagacaggaaagcaacagaggaaggtttgtatctcgcacatcccctggtgga
ctcagacaaaggacaagagggggaaaaggacaaaagggtcagaatggcatttcacagatg
agatcgactgctgtagaaagtggcccaaggagaggtgaggaagccggaagctgccctatc
tgtggaggttcattccagctggatttccttccccttcatgcttctcgctgtggagaggtg
gtggatcttgaagagtcctcatcctcttcagaggaagctctgcacagcggaggcatcagt
ttctcccacacggaggaatctccctgggtctcgtgtcctctttgtggctttcggtacagt
gcctcggtgattgaacagcatgccagcaggtgtggcgagcaggaaagctctggcacctcc
tcgccttgggttgaatag

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