Geotrypetes seraphini (Gaboon caecilian): 117362245
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Entry
117362245 CDS
T09159
Symbol
NUP58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117362245 (NUP58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117362245 (NUP58)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117362245 (NUP58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
PSY3
Nup49_C
DUF6444
GAIN_ADGRA3
Motif
Other DBs
NCBI-GeneID:
117362245
NCBI-ProteinID:
XP_033804222
UniProt:
A0A6P8R1Y5
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Position
6:45181738..45339185
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AA seq
588 aa
AA seq
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MATGFSFGASTGTTTLGASGTAAGGGFSFGPTTASNPASTGGFSFGTLGSTASVTTSAAT
GGFGSGPFVAKPATGFTLGGTSAVTPATTSAASGFSLGFSKPSASATPFALPITSTSAGG
LAFSSALTSTPASGSTGFTLNLGNTTSTTTSAPIAFSLGGPLTSLGSTPFQNAVAPTTGL
GQNTLGLGLTLGTPAAASASVSEGLGGIDFSSSSDKKSDKAGIRPEDSKALKDENLPPVI
CQDVEHFQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVAASGLQRNTLAIDKL
KMETAQELKNAEIALRTQKTPPGLQHENTAPADYFRALVEQFEVQLQQYRQQIEELENHL
ATQANNSHLTPQDLSLAMQKLYQTFVALAAQLQSIHENVKILKDQYLGYRKTFLGDATEV
FEARRIEAKKWQSIPRITTGPTPFSSIPNAAAVAMAATLTQQQQPATGPQPSLGVGFGAP
FGSGIGTGLQASSLGSSNLGGFGSSSAFGSSTTGPSSFGFGSTTKPSGSLSAGFGSSSTS
GFNFSNPGITASAGLTFGVSNPSSAGFGTGGQLLQLKKPPAGNKRGKR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggccaccggtttctcctttggggcatcaacgggcactaccaccttaggggcttcggga
acagcagcaggcggaggcttttcctttggaccaacgacagccagcaatcctgcttccact
ggaggattcagttttggtactcttggttctactgcttcagtaaccacctctgcagcaact
ggaggatttggaagtggaccttttgtagcgaaaccagcaactggatttacattaggagga
actagtgcagtaacacctgccactacatctgcagcttccggtttcagtttggggttcagt
aaaccttcagcttctgctacaccatttgctttgcctattacttctacctcagcaggtgga
ctcgctttttcatctgccttgacatcaactccagcttcagggtccactggctttacatta
aacttgggcaatacaacaagcacaacaacatctgcaccaatagctttttcccttggaggg
cctctgactagcttaggaagcaccccattccagaatgcagttgctccaactacaggtctt
ggacaaaacactttaggtttgggtttgaccttggggacacctgcagctgcatcagcctca
gtcagtgaaggacttggtggtatagattttagtagctcttcggataaaaagagtgataaa
gcaggaataagaccagaagatagtaaagcactcaaggatgaaaatctacctccagtaatc
tgccaagatgtagaacatttccagaagtttgtgaaggagcaaaaacaggttcaggaagaa
attagtcggatgtcttccaaagcaatgcttaaagtacaagaagacattaaagccttgaag
cagttgctgtcagtggctgccagtggacttcagagaaatactcttgccattgataaatta
aaaatggaaactgctcaggagctaaaaaatgctgagatagctttaagaacacagaaaaca
cctcctggccttcagcatgaaaacacagccccagcagattatttcagagcattagttgaa
cagttcgaagtacagttacagcagtacagacaacaaattgaagagctcgaaaatcatctt
gccactcaagctaacaattcacatttaacaccacaagatttgtctttggcaatgcagaag
ctttaccagacatttgtagctttagctgctcaacttcaatcaatacatgaaaatgtaaaa
atactcaaagatcagtaccttggctataggaaaacctttctgggagatgccacagaggtg
tttgaggcaagacgaattgaagccaagaagtggcagagcatcccacgaattactactggg
cctacacctttcagcagcataccaaatgcagcagccgttgctatggctgcaacacttaca
cagcagcaacagcctgctacagggccacagccatctcttggagttggttttggagcacca
ttcggctcaggtattggcactggcttgcaggcaagcagcttaggttcttcgaaccttgga
ggatttggaagtagctctgcttttggaagcagtaccacaggcccctcttcatttggattt
ggaagtactactaaaccatctgggagtcttagtgcaggttttggcagttcgagtacatct
gggtttaacttcagcaaccctggcattactgcatctgctggcttaacatttggagtgtcg
aatccttcatctgcaggttttgggacaggagggcaattgcttcagctaaagaaacctcca
gcgggaaacaagagagggaaaagataa
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