Geotrypetes seraphini (Gaboon caecilian): 117362373
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Entry
117362373 CDS
T09159
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein
KO
K06839
slit 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117362373 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gsh00536
]
117362373 (SLIT2)
Glycosaminoglycan binding proteins [BR:
gsh00536
]
Heparan sulfate / Heparin
Axon guidance molecules
117362373 (SLIT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
LRRNT
Laminin_G_2
Laminin_G_1
LRR_9
LRR_1
hEGF
LRRCT
EGF_TEN
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_TGFA-like
Motif
Other DBs
NCBI-GeneID:
117362373
NCBI-ProteinID:
XP_033804554
UniProt:
A0A6P8R3I3
LinkDB
All DBs
Position
1:complement(242996312..243843074)
Genome browser
AA seq
1521 aa
AA seq
DB search
MGASGCWKVPAWLGVLLALLSPGTPQPCPAQCSCLGTAVDCHGLSLRTVPRNIPRNAERL
DLNGNNLTRITKTDFANLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQVFPE
LLFLGNPKLYRLDLSENQIQAIPRKAFRGAVDVKNLQLDYNQISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPA
HLRGHNVAEVQKREYVCTGHQSFMAPSCSVLHCPVACTCSNNIVDCRGKGLTDIPTNLPE
TITEMRLEQNSIKVISPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKI
TELPKNLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR
AIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSG
TEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKVPDHIPQYTAELRLNNNEFTVL
EATGIFKKLPQLRKINLSNNRIIDIEEGAFEGATGVIEVLFTSNRLESVRHKMFKGLESL
KTLMLRSNRISCVGNDSFTGLSSVRLLSLYDNQLTTVAPGAFDTLHSLSTLNLLANPFNC
NCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLSRCP
AECTCLDTVVRCSNKGLKALPKGIPKDVTELYLDGNHFTLVPKELSNYKHLTLIDLSNNR
ISTLSNQSFSNMTQLLTLILSYNRLRCIPTRTFDGLRSLRLLSLHGNDISLLPDGAFNDL
SALSHLAIGANPLFCDCNMQWLSDWVKSEYKEPGIARCAGPGELADKLLLTTPSKKFTCQ
GSVDVNILAKCNPCLSNPCKNDGTCNNDPVEFYRCTCPYGFKGQDCDIPIHACISNPCKH
GGTCHLKEGEKDGFWCTCADGFEGENCEVNIDDCEDNDCENNSTCVDGINNYTCLCPPEY
TGELCEEKLDFCAQELNPCQHDSKCILVPKGYKCDCTPGYVGEHCDIDYDDCQENKCKNG
AHCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNFECQNGAQCITKVNEPVCQCL
SGFQGSKCEKLVSVNFVNKESYLQIPTAKVRLQTNITLQVATNEDSGILLYKGDKDYIAV
ELYRGRVRVSYTTGSYPTSAIYSVETINDGNFHIVELLVMDQTLSLSIDGGSPKVITNLS
KQSTLSFDSPFYVGGMPLKNNFAALRQSPGQNGTSFHGCLRNLFINNDLQDFKKMMLQAG
ILPGCEPCNKKVCVHGTCHATSQSGFTCECEGGWTGPLCDHQANDPCLGNKCIHGTCLPI
NAFTYSCKCLQGYGGVLCDEGEDLFNPCQSLKCKHGKCKISGLGKPYCECSSGYTGDICE
KEVSCRGERIRDYYQKQQGYAACQTTKKVSRLECRGGCSNSQCCGPLRSKRRKYSFECTD
GSSFVDEVEKVVKCGCTKCPS
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcctcgggctgctggaaggtgcccgcgtggctgggcgtgctgctggcgctgctg
agcccggggactccgcagccctgtccggctcagtgctcgtgcttgggcaccgcggtggac
tgtcacggactctccctgcgaaccgtgccccgcaacatcccccgcaacgcggagcgcctg
gatctgaacggcaataacctcacaagaatcaccaagacagacttcgctaatctgagacac
ctgagagtccttcagctcatggagaacaagattagcaccattgaaaggggagccttccag
gatctgaaagagctggagagactacgtctgaaccgaaataaccttcaagtattcccagag
ctgctttttttggggaacccgaagctctacagacttgacctcagcgaaaaccagattcag
gccattccgaggaaagcattccgcggtgcggtggatgttaaaaatctgcagctggattac
aaccagatcagctgtatcgaagatggtgcgttcagagctctgcgtgacctggaggtgctt
acactcaacaataacaacatcactcgactctcagtggcaagtttcaaccatatgccaaaa
ctacgaaccttccgacttcactccaacaacctatactgtgactgccacctcgcctggctg
tcggactggttgcggcagcgaccgcgtgttggcctctacactcagtgcatgggacctgcc
cacctgagagggcacaatgtagctgaggttcaaaaacgcgaatatgtttgcacagggcac
cagtctttcatggctccttcctgcagtgtcctgcattgtcctgttgcgtgtacctgcagt
aacaatattgtggattgtcgtggaaaaggcctgactgacattccaactaaccttccagag
acaattactgaaatgcgactcgaacagaattctatcaaagtcatttctcctggagctttc
tcaccgtataaaaagcttcgaagaattgacctgagcaataaccagatttctgaaatagcg
cctgatgctttccaaggccttcggtctctcaactctctggttctttatggaaataaaatt
acggaactgccgaaaaacctgtttgaggggcttttttctttgcagttgttgttactaaat
gccaacaagataaactgcttacgagtagacgccttccaggatctgcacaatctgaacctc
ctgtccttgtatgacaacaagctgcagaccatcgccaaaggcaccttttcaccgctccgt
gctattcaaactctgcatttggctcagaacccgtttatctgtgactgccatctgaagtgg
ctagcggattatctccacacaaaccctattgagaccagcggtgcccgctgcaccagcccc
cgccgtttggccaacaaaaggatcggtcagattaaaagcaagaaattccgctgctcaggc
acggaggattaccgatccaaactgagtggagattgctttgcagacttggcatgtcctgaa
aaatgccgctgtgaaggaaccaccgtagattgctccaatcaaaaactcaccaaagtccct
gatcacattccccagtatacggctgaactgcgtctcaacaacaatgaatttacagtactg
gaagctactggaatcttcaagaaacttccacagcttcgcaaaataaatctgagcaataac
aggattatagatattgaagaaggagcctttgagggagccaccggtgtgattgaagtgctc
tttaccagcaaccgcttggaaagtgttcgccacaagatgttcaaagggctggagagtctt
aaaacattgatgctgcgcagcaatcgcatcagttgtgtcggtaacgacagtttcacgggg
ctgagctctgtccgcctactctctctctatgacaatcagctcaccactgttgcaccaggt
gcctttgatactctgcattccctatctacattgaacctcttggctaatccttttaactgc
aattgccacctggcctggttaggggactggctgagaaagaaacgcatcgtaaccgggaac
cctcgctgccagaagccttacttcctgaaagagattcccattcaagatgtagccatccag
gactttacttgcgatgatggaaatgatgacaatagctgttctccactctctcgctgccct
gccgaatgcacttgccttgacactgtggtccgctgcagcaataaagggcttaaggccttg
cccaaaggaatccctaaagacgtaacagaactatatttggatggtaaccattttactctt
gttcctaaggagctctccaattataaacatttaacactcatagatttaagtaacaacaga
atcagcactctttccaaccagagcttcagcaacatgacccagctgcttactttaattctg
agctacaaccgtctgagatgtatacccacccggacctttgatggcttaaggtcacttaga
ttgctgtctttacatggtaatgatatttctcttttacctgacggagcttttaatgacctt
tcagcactatcacaccttgctataggggccaatcctcttttctgcgattgcaacatgcaa
tggctatcagactgggttaaatcggaatacaaagagccaggcattgcccgatgtgccgga
cccggggaactggcagacaaacttcttcttaccacgccctccaaaaaattcacctgccaa
ggttctgtggatgtaaatattcttgccaagtgtaacccctgcttatccaacccatgtaaa
aatgatgggacctgcaataacgacccggttgagttctataggtgcacctgtccatatggc
tttaagggccaggattgtgatatcccaattcatgcctgcatcagtaacccttgcaaacat
ggtggaacttgtcatttaaaagaaggagagaaagatggattttggtgtacatgtgccgat
ggctttgaaggagaaaactgtgaagtgaatatcgatgactgtgaagataatgactgtgaa
aataattccacctgcgtagacggtattaacaactatacctgcctttgcccacctgagtac
acaggtgagctgtgcgaggagaaactagatttctgtgcccaggagctgaacccctgccag
catgactcaaaatgcatcctcgtgcccaagggttacaaatgtgattgcacacctggatat
gtgggggaacattgtgatattgactatgacgattgccaggagaataagtgtaaaaatgga
gcacactgcaccgatgcagtgaatggatatacatgtatctgccctgaaggatacagtggc
ctgttttgtgagttttcaccaccaatggttctacctcgcactagcccatgtgataatttc
gagtgccagaatggggctcaatgtattacaaaagtaaacgaaccagtttgtcagtgttta
tcaggctttcagggcagcaaatgtgaaaaattggttagtgtgaattttgtgaataaagaa
tcctacctgcaaattccaactgccaaggttcgtcttcagaccaatatcactctgcaggtt
gccacaaatgaggacagtggaattctcctgtacaaaggtgacaaggactacatagcagta
gagttgtaccgaggacgcgtgcgtgtcagctataccacaggatcctatccaacttcggca
atttacagtgttgaaacaataaatgatgggaatttccacattgtggagttgttagtcatg
gatcagactttatcgctgtctatcgacggaggaagccccaaagtcattactaatttatct
aaacaatctacactcagctttgactctccattttacgttggaggtatgcctctcaaaaat
aattttgctgctttacgccagtcacctggtcaaaatggcaccagctttcatggctgccta
cggaatcttttcatcaataatgatctccaggactttaagaagatgatgctgcaagcaggg
attctcccgggttgtgaaccatgcaacaagaaggtgtgtgtgcacgggacctgccatgcc
acgagccagtcaggttttacctgtgagtgtgaaggagggtggacaggaccactttgtgat
catcaagcaaatgacccctgccttggaaacaagtgtatacacggtacctgtttgccaatc
aatgcatttacctacagttgtaaatgccttcagggatatgggggagtcctttgtgatgaa
ggggaagatttatttaatccatgccagtccttgaaatgtaaacatgggaagtgcaagatt
tctggcctcggaaaaccatattgtgaatgcagcagtggatatactggggacatttgtgag
aaagaagtctcttgtcgaggggaacgaatccgagattactaccaaaagcagcaaggttat
gctgcttgccagacgaccaagaaggtatcaagattagaatgcagaggaggctgttcgaat
agtcagtgctgtggaccactgaggagcaaacggcggaaatattcctttgaatgcactgat
gggtcttcatttgtggacgaagtggagaaagtggtgaaatgtggctgtacaaagtgccct
tcctag
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integrated database retrieval system
