Geotrypetes seraphini (Gaboon caecilian): 117362385
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Entry
117362385 CDS
T09159
Symbol
FREM2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117362385 (FREM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
gsh04091
]
117362385 (FREM2)
Lectins [BR:
gsh04091
]
C-Type lectins
Lecticans
117362385 (FREM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
117362385
NCBI-ProteinID:
XP_033804566
UniProt:
A0A6P8RK29
LinkDB
All DBs
Position
6:56881930..57159347
Genome browser
AA seq
3137 aa
AA seq
DB search
MHRLWHRGTLPPPRTRAASVKVQRRQLLPLLLGTWLAVAAGGVGSQEGRLDSVALSYGPV
EEAVRVADSGIRVPLGRSVFLDPIRDLMIHVQPGDRCHIAVLDKEPLSQRPGRLTPSKFP
CDFGPQEVKYSHLGSRSPSRDRVNLQLRYDNQTNTVIIPFTMEVEVMFTQLEIVTRNMPL
TVDKLLGFSNPVDKKTLEFTFDKASEVCKVASLVGLGGLPRYGNLINLVKGTQMMDCEEF
LKLEVRYQHTASTKSPNRDFLPMVVELRDPEGSLLKQEYFQILIRIREGLENLPPKPSFI
SLMMMEVDQFVMTAITPDMLAAEDSESDADDLIFNITSSFGPQHGYIVSTDDQNLPLTSF
YQRDLRELKIAYKPPSTDSDVERILEIELEVVDTEGATSDPFAFMIVVKPMNTLAPVVTR
NTGQLLYEGQSRALSSSHNLEISDEDNLESVKVTVLDGLRHGHLTVLGAPNRKYFTASDL
DSGQVIYQHDGSNTYSDNIIFRMDDGRHEVEFLFPITVVPTDDEPPILNANTGLLLSEKE
MAPITPFALSATDIDSEDSTIKFTLEMPLSTIGEVVLRQQGAPDDPSTWHYVEKQDSYEK
VVTEWFQQDILDGKLFYRHVGPHSTATVTDHLIFRVQDDNDPPNQSGEHTLIIKINPIDD
LPPELYPDSTLKMVVQEYQVTYFRKKFLRYADLDSDDRDLKYTIVKPPTDTDENNPVAMG
SIVLTENHNIIINEFTQAQVNHHKISYKPPDLDLGITARIVQFQYTVEDTAGNAAEGTFT
IFLQPVDNKPPRIINTGFTVFERGTHIITEKELDATDADTDRNQISFTLTKPPEHGQLQY
SSYVMSVGEAFDLNDISNGRIAYVHNGDESINDFCTLDVSDGVHVVTIIIKITVRLLDDE
MPTIMLPAGTIGSYLDVLENSYAEITPAVIQGTDEDTDDLMLTFIVEDPPLYGDIHVNGI
AAERFTQRDIIEGAVVYVHTGGELGLYKKEDSFNLSLSDMSEEWTVGGNTIQGVQVHVTI
LPVDNKAPGVTVGEQFTVIEGDKNLITPSHLVAKDMDTPNDDILCTIIGQPTSGYLENIS
PAPGSEKSRAGTAISAFTLKDLRLGHIYYVQSIHKGVEPVEDRFNFRCSDGINFSQRHFF
PIVIIPANDEKPEIFMREFVVMEGMSLVIDTPILNAADGDIPADDLTFIITKPPKHGQIV
NQLTNGTVLVESFSLDQIKESSSIIYEHDDSETKEDSFEVKLSDGKYTVEKQILVMVIPA
DDETPRMTINDGLEIDMGETKHISSRILKATDLDSDDKTLTYVIRYGPGQGLLQRKKLTG
GVENITLGMNFTQDEVDKDVIQYVHFGQEGIRDLIKFDVTDGINPLIDRYFYVTVGSIDI
VYPDVISKGVSLKEGGKVTLTTDLLSTSDLNSPDEHLVFSITRAPVRGHLECTDQPGVSI
SSFTQLQLAGNKIFYIHTSDDEVKMDSFEFEVTDGYNPVFRTFRISISDVDNKKPVVTVH
DLFVSESENKLITPFELTVEDRDTPDGLLRFIVTQVPVHGRLLFNSSRMLTSFTKQDLND
NLISYKHDGTESTEDSFSFTVTDGTHTDFYVFPNTVFETRKPQTMRIQVIAVDNGIPQVV
VNKGATTLRMLATGHLGFLISSKALKAEDRDSVYNSLRFRIVEGPQYGMLINLDKGNHSI
DHFTQADIDDMKICYTLRTGSNATSDIFHFTVEDSGGNKLKNQYFRLNWAWISLEKEYYV
VNEDAKHLEVILKRRGYLGETSFVSISTVDGTAEKDKDFKGKTQKQVQFNPGQMTASWKV
RILSDGAFEQSEMFRIVLSEPVMAVLEFPEVATVEIIDPGDESTVFIPQSTFTIEEDIGE
LFIPVRRSGDVSQELMVICYTEQGEQGTAVGTIPSSVLSYSDFISRPEDHNSVLRFDRGE
EEKMCRVVIIDDSLYEEPEVFNVTLSMPMGGRIGSAFPSTRITIVPDDDDEPAFYFGDVE
YSVDESAGFIEVRVWRTGTDLSKTATVTVRSRKTESLSAEAGIDYVGISRNLDFAPGVTM
QTFRVTILDDLGQPILEGTEKFELVLRMPMNAVLGEPNKATVFINDSISDLPKVQFKESV
YTGNENDGQITALVYRSGDVGYRSTVRCYTRQASAQVMMDFEERPNTDSSIITFLPGETE
KPCILVLVDDTFHEEEEELRLVLGSPRSDSPFGASIGEQNETLIKIKDDADKAIIRFGET
KFSVNEPEEPGKMVVLKIPILRLGDASKVSIVRVHTKDGSATSGEDYHPVSEEIEFKEGE
TQHFVEIEVLYDGTREMREAFTVHLRPDENMVAETQMTKAIVYIEEMNSMADVTFPSVPQ
VTSLLIYDDISRIKEVPIPIAGYPVVCVTACNSKYLDYDKTGSICASEQINDTLTRYRWL
VSAPTGLDGVTSPMREVDFDTFFTSSKMITLDSIYFQAGSRVQCAARAVNSNGNEGLELL
SPVVTVNLEEGLCQPRGPDVVGAEPFSAKLRYTGPDDPDHPNLIKLTVTLPHIDGMMPII
STRELSNFELTLSPDGTRVGNHKCSNLLDYTEVKTRYGFLTDAMKNLDVIGETSPYQYST
SLRGSGTLRFYRNLNLEACLWEFISYYDMSELLTDCGGTIGTDGQVLNLVQSYVTLRVPL
YVSYVFHSPVGVGGWQHFDLQSELRLTFVYDTAILWKDGIGSPPEADLQGSLYPTSMRIS
DEGRLVVNFKTEARFHGSFVMSHPASSLGSLIMSMDHPGLTFTLSLVRSEPTYNQPIQQW
SFVSDFAVRDYSGTYTVKLIPCTTSPYQEYSIPVVCNPREPVTFDLDIRFQQVSDPVAAE
FSLNTQMILLSKKALWLSDGSMGFGQESDVAFLEGAIIYGRVMVDPVQNLGDSFYCSIEK
VFLCTGSDGYVPKYNPQNAEYGCLADSVSLLYRFKILDKAQPETQATSFGNVLFNAKLAV
DDAEALPLVRQPGSDGFKVDSAPLFQVSSGREWYIHAIYTVRSKDNANRGIGKRSVEYQY
HSFINGQSPESASWTRERREVKDVPDLASDIGVENNRGTNIQHIALDRTNKKVVPPNDIT
LDGIIPRELNDRDVEVNIITIIGGIAAGLLAICFISVVILLVKHKEKSNKNDTAKESRSS
QLMMSPSHGYNSDSSEV
NT seq
9414 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcctatggcaccgcgggactctgccgccaccccggacccgagcggcttctgtc
aaagtgcagcggcggcagctgcttccactcctgctggggacttggctggcagtggcagcg
ggcggggtggggtcgcaggaagggcgcctggacagtgtcgccttgtcgtacggccccgtg
gaggaggctgtgcgggtggctgacagcgggattcgagtgcctttggggagatcggttttc
ttggacccgatccgcgacctgatgattcacgtgcagcccggggataggtgtcatatcgcg
gtgctggataaagagcccctttctcagagacccggtcgattgactccaagcaagtttccg
tgtgacttcggaccccaagaggtgaagtattcgcatctggggtcccgcagcccttctaga
gaccgagtgaatttgcagctcaggtatgacaatcagaccaatactgtgatcatccctttc
acgatggaggtggaggtgatgtttacccagctggagattgtaactcgaaatatgcccctt
actgtagataaactattgggctttagtaaccctgtcgacaagaagacccttgaatttact
tttgacaaagcttccgaggtgtgtaaagttgccagcttggtaggacttggaggactgccc
agatatgggaacctgataaatcttgttaagggaactcaaatgatggactgtgaagaattt
cttaaactagaggtgcgctatcagcacacagccagcaccaagtcacctaacagggacttc
ctccccatggtggtggagctccgtgacccggagggcagtttgctcaagcaggagtatttt
cagatcctgatcaggattcgggaggggctagagaatcttcctcccaagccaagttttatt
tctttgatgatgatggaggtggaccagtttgtcatgacagctattaccccagacatgctg
gctgccgaggactccgagtcggatgcagatgacctaatattcaacatcacttcatccttt
ggtccccagcatggttacattgtcagcacagatgatcaaaatctacctctcacatccttc
tatcagcgggacctgcgtgaattgaagattgcttacaagccaccctcgactgactcggat
gtggagcggatcctagagatagagttggaggttgtagacacagagggtgcaacctcagat
ccttttgccttcatgattgtcgtaaagcccatgaatacactagctcctgtggtgactcga
aacacaggacagttgctgtatgaaggccagtctcgagctctttctagctcccataacttg
gagataagtgatgaggacaatctggagtctgtaaaagtgacggtgttggacgggctgaga
catggacacctgacagttctaggtgcccccaacaggaaatacttcactgcctcagatttg
gactctgggcaagtcatctaccagcatgatggcagtaacacctacagtgacaacatcatc
ttccgcatggatgatggtcgccatgaggtggaattcctcttccccatcactgtggtgccc
actgatgatgagcctcctatcctcaatgctaacacaggccttttactatcagagaaggag
atggcacccatcaccccttttgcccttagcgccactgacattgactcggaggattccacc
atcaaattcactcttgagatgcctttgtccactattggggaggtggtgttgcgccagcag
ggagctcctgatgacccttctacttggcactatgtggaaaagcaagattcatatgagaaa
gttgttactgaatggttccaacaggatatcctagatggcaaactgttttacagacatgtt
gggccccatagcaccgcaacagtcacggatcacctgatattcagggttcaggatgacaac
gatcctcccaaccaatcaggagagcacacactgatcatcaaaatcaaccccattgacgat
ctcccacctgagctgtacccagacagtacattaaaaatggtggtacaggagtatcaagtg
acctattttagaaagaagtttcttcgttatgcggatttggactcagatgacagagaccta
aaatacacgatcgtcaaacctccaacagacacagatgaaaataatcctgtagcaatgggc
tccattgtactgactgaaaatcacaatattataatcaatgaattcacccaggctcaggtc
aaccaccacaaaatctcttacaaaccccctgacctagacctgggaatcacagctcgcata
gtgcagtttcagtacacagtggaggacaccgccggaaacgcagcggagggcactttcact
atctttctgcagccagtggataacaaaccccctcgtatcatcaatactggttttacagtg
tttgaaagagggactcatatcatcacggaaaaggaattggacgcaaccgatgcagacact
gacagaaaccagatatcttttacacttaccaagcccccagagcatgggcagctgcaatat
tcctcttatgtcatgtctgtaggtgaagcattcgatttaaatgacatttctaatgggagg
atagcttatgtccacaatggagatgagtccattaatgatttttgtactttggatgtcagt
gatggcgtgcatgttgttactataatcattaaaattacagttcgccttttagacgatgaa
atgcccactatcatgctacctgcaggtaccattggctcctatttagatgtcttagaaaac
agttatgctgaaattacccctgccgtcatccagggtacagatgaagacacagatgacctc
atgttgacttttattgtagaggatccccctttgtatggagacattcatgtaaatgggatt
gctgctgagcggtttacacagagggatattattgagggagctgtggtttatgttcacacc
ggtggggaactaggcctctataagaaagaagactcatttaatctaagcctctcggatatg
tctgaggaatggactgttggaggtaacacaattcaaggtgttcaggtccatgttacaatt
cttccagttgataacaaggccccaggtgtcacagtgggggaacaatttactgtgattgaa
ggtgataaaaatcttattacgccttcacatttagttgctaaagatatggacactcctaac
gatgacatactttgcactattataggccaacctacctctggttatttagaaaacatttct
cctgctccaggatctgagaaatccagagcaggtacagctataagtgcatttactttgaaa
gatctcagattgggacatatttattatgtacagagtattcataagggcgtggagcctgta
gaagacaggtttaattttcgctgctctgatggcatcaatttttcacagagacatttcttt
cctatagttattattccagccaatgatgaaaaacctgaaatctttatgagagaatttgtc
gtcatggaaggcatgagcctggtaattgatacccccatccttaatgcagcagatggagac
attcctgctgatgatttgacttttattattaccaagcctcctaagcatgggcagatagtg
aaccagttgaccaatggcacagtgctagtggagagcttcagcttggatcagattaaggaa
agctccagcatcatctatgaacatgatgattctgaaacaaaggaggacagttttgaggtg
aagctctctgatggcaaatacacagttgagaaacaaatacttgttatggtcatccctgca
gatgatgagactccaagaatgaccatcaatgatggactagaaattgacatgggagaaacc
aaacacatttcgagcagaatattaaaggctactgatttagattctgatgataaaacattg
acttacgttatccgttatggtccaggacaaggtctgctgcagaggaaaaaacttacaggt
ggagttgagaacattacattgggaatgaactttacacaggatgaagtagacaaggatgta
atccaatatgtacactttgggcaagaaggtattcgagatctcattaaatttgacgtgaca
gatggtatcaatcctcttattgatcgatatttctatgtaacagttggcagtattgacata
gtctacccagatgtaatcagcaaaggagtatccttaaaagaaggtggaaaggtaactctt
accactgacttattgagtaccagtgacctaaacagccctgatgaacacttggttttcagc
atcaccagagctcctgttcggggtcatctagagtgcacagatcaacctggggtgtccatc
tcatctttcacccagcttcagttagcaggtaacaaaatcttctacattcacacatcagat
gatgaggtgaaaatggacagttttgagtttgaagtcacggatggctacaaccctgttttt
cgcacattccgaatttctatctctgatgtagataataagaaaccagtggtgactgttcat
gatctctttgtaagtgagagtgagaataaactgattaccccctttgagctgactgtagag
gacagagatactcctgatgggctgctaagattcattgtcacccaagtgcctgttcatggg
agactcctgttcaacagcagcagaatgctgacatccttcaccaagcaggaccttaatgac
aatctaattagctataaacatgatggcacagaatctacagaagacagcttctcgttcaca
gtcactgatggaacccatacagatttctacgtcttcccaaacacagtgtttgaaacaagg
aaaccgcaaacgatgagaatccaggttatagccgtggacaatggcatacctcaggttgta
gttaacaagggtgccaccaccttgcgcatgttggctactggtcatctggggtttcttatc
agcagcaaagcactgaaagcagaggacagggacagtgtgtacaattctctgcgcttccga
atcgtagaggggcctcagtacggaatgttgatcaatctggataaaggcaatcacagtatc
gaccatttcacccaagctgatattgatgacatgaagatatgctacactctaagaacagga
tctaatgctaccagtgacatcttccatttcacggttgaagacagtggcggtaataagttg
aagaaccaatattttcgtttgaactgggcctggatctccttagaaaaggaatactatgtg
gtaaatgaagacgccaagcacctggaagtcattctgaagcgcagaggctatttgggagaa
acctcctttgttagtatcagcaccgtagatggcactgcagagaaggataaagacttcaaa
gggaagactcagaagcaggtgcagttcaatccaggccaaatgacagctagctggaaagtg
cggattctgagtgacggggcatttgagcagtcagaaatgttcagaattgtgctttcagag
cccgtcatggctgtgcttgagttcccagaagtggcgactgtagaaattatcgaccctggc
gatgagtcaacagtctttattcctcaatctaccttcactattgaggaagacattggtgag
ctgtttattccagttcggagaagtggagatgtgagccaggaactgatggttatctgttac
actgagcaaggtgagcaaggaaccgctgtaggaactatcccatcctctgtgttatcttac
tctgactttatctccagacctgaggaccacaatagtgtgctccgttttgacagaggtgaa
gaggagaaaatgtgtcgtgtggttatcattgatgactccctgtatgaagagcccgaggtg
tttaatgttacactgagcatgcccatgggtggaagaattgggtcagcttttccgtctact
cgaattactattgtgcctgatgatgatgacgagcctgctttctactttggagatgttgaa
tactctgttgatgagagcgccggcttcatcgaagttcgagtctggagaacgggaaccgat
ctctccaagactgcaactgttacagttcgatcacgcaaaactgaatcattatctgctgaa
gcggggattgactatgttggcataagccgtaatttggattttgctcctggagtcaccatg
cagaccttccgtgtaactatcctggacgatcttggacagccaatattggaagggactgag
aagtttgaactggtgttacgtatgccgatgaatgctgtccttggagagcccaacaaagcc
acggtttttatcaatgactctatctctgacttaccaaaggtacaatttaaggaatcagtg
tacacaggtaatgaaaatgatggccagattactgcactggtgtacaggagcggcgatgtg
ggctacagatccacagtgcgatgttatactcggcaagcatctgcacaagtaatgatggac
tttgaggaacgtccaaatactgacagttccattatcactttccttcctggtgagacggag
aagccatgcatccttgtactggtggacgacacttttcatgaagaagaggaggagctgcgt
cttgtgctcggtagcccaagaagtgactctcctttcggtgcatccattggtgaacagaat
gaaactctgataaagatcaaagacgatgcagacaaagccattattcgctttggcgagacc
aaatttagcgtgaatgaaccagaagaacctgggaagatggtggtcctaaaaattccaatt
cttcgtcttggagacgcatcaaaggtttctattgtgagagtccacacaaaggatggctct
gctacctctggagaagactaccaccctgtatcagaagaaattgagtttaaagaaggtgag
acccagcactttgtggaaattgaagttctgtatgatggaacaagggaaatgagagaggcc
ttcactgttcacctgagacctgatgagaacatggtggcagaaactcagatgactaaggcc
atcgtgtacatcgaagaaatgaacagcatggcggatgtcactttcccatctgttccccaa
gtgacctcactcttgatttatgatgatatttcaaggattaaagaggttcccattcccatc
gctggctatcctgtggtgtgtgttacggcttgcaattccaaatacttagactatgacaag
actggttcaatttgtgctagtgagcagatcaatgacactctgacacgttaccgctggctg
gtcagtgctcctaccggccttgatggtgttaccagtcccatgagagaggtggattttgat
acatttttcacttcttccaagatgatcacgcttgattccatttattttcaagccgggtct
agggtgcaatgtgccgctcgtgctgtaaactccaatgggaacgaaggcctggaactcctg
agtcctgttgtaacagtgaatcttgaggagggactgtgtcaacctcgaggaccagatgtg
gttggtgcagagccattctctgccaagctgcgctacaccggaccagacgatccagaccat
ccaaatctcatcaagctaacagtcacattgccgcacatcgatggtatgatgcccattatc
tctacaagagaactctccaactttgaactcacactaagcccggatggcaccagggttgga
aatcataagtgctccaacctgctggattacactgaagtaaagacccgctatggattcctg
actgatgccatgaaaaacttagatgtgattggcgaaacatctccttaccaatacagcaca
tccctcagaggatcagggaccttacgcttctaccgaaatcttaatcttgaagcctgccta
tgggagtttataagctactatgatatgtcggagctgctcactgactgtggtggcaccatt
ggcacagatggccaggtcctaaacctagtgcagtcttacgtcactcttcgtgttcccctg
tacgtctcctatgtttttcactctccggtgggtgtgggtggctggcagcacttcgaccta
cagtctgagcttcgactcacatttgtgtatgacactgccatcttgtggaaggatggaatc
ggcagcccaccagaggcagatcttcaaggttctctctaccctacaagcatgcgcatcagt
gacgaaggacggctggtggttaacttcaagactgaggctcgtttccacggctcattcgtg
atgtcacatccagcatcttctttgggttccttgatcatgtcaatggatcatccgggccta
acatttactctcagcctggtacgaagtgaaccaacatacaaccaacccatacaacaatgg
agctttgtttctgattttgcggtgcgagactattctggaacctacacagtaaagctgata
ccatgcaccacttcaccatatcaggaatacagcatacctgttgtgtgcaaccccagggag
ccagtcacttttgaccttgacatcagattccaacaggtgagcgaccctgtggctgccgag
ttcagcctgaatacccagatgatcctcctgtctaagaaggccctgtggttatctgatgga
tcaatgggttttggccaggaaagtgatgttgcttttctggaaggtgcaattatctatggg
cgcgtaatggtggatccagtacagaatctgggtgattctttttactgtagcatcgagaag
gtatttctttgcactggatctgatggctatgtccccaagtataatccacagaatgctgaa
tatggctgcttagcagactcggtatctcttttgtacagatttaagatcctggataaagct
cagccagagacacaagccactagttttggaaatgtgcttttcaatgcaaaactggcagtg
gatgatgccgaagctttgcctttagttaggcaacctggatctgatggatttaaagtggac
tcagctccactcttccaggtatcttcaggtcgtgaatggtacattcatgcaatttataca
gtaagatcaaaagacaatgctaatagaggcattgggaaaaggagtgtagaatatcagtac
cattccttcattaatgggcagagccctgaatctgcatcatggactcgcgagaggagagag
gtcaaagatgttccagaccttgccagcgatattggtgttgaaaacaataggggaaccaac
attcagcacatcgcattggatcgtaccaacaagaaagtggtccctccaaatgatattact
ttagatggaattattccaagagagttgaatgacagagatgttgaggtcaatataatcacc
atcatcggaggaattgctgctggacttttagccatttgttttatttcagttgttatcttg
ctggtaaaacataaagagaagtcaaacaagaatgatacggcaaaagaatcaagaagcagt
caactaatgatgtcgccatcacatggctacaacagtgacagctcagaggtttga
DBGET
integrated database retrieval system
