Geotrypetes seraphini (Gaboon caecilian): 117362405
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Entry
117362405 CDS
T09159
Symbol
TFDP1
Name
(RefSeq) transcription factor Dp-1
KO
K04683
transcription factor Dp-1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03083
Polycomb repressive complex
gsh04110
Cell cycle
gsh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117362405 (TFDP1)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117362405 (TFDP1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117362405 (TFDP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117362405 (TFDP1)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117362405 (TFDP1)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
117362405 (TFDP1)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
117362405 (TFDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
alpha-hel2
FMP23
YcbB
Motif
Other DBs
NCBI-GeneID:
117362405
NCBI-ProteinID:
XP_033804601
UniProt:
A0A6P8RK36
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Position
6:complement(158534575..158804721)
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AA seq
415 aa
AA seq
DB search
MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNTLGKQLLPKTFGQSNVNIAP
QVVIGTPQRPSAPNTILVGSPHTPNTHFVSQNQATDSSPWSAGKRNKKGEKNGKGLRHFS
MKVCEKVQRKGTTSYNEVADELVAEFSTTDNHISPNESAYDQKNIRRRVYDALNVLMAMN
IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
RHTEQQANRSPPANSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
KRMGMACGLESGSCSAEDLKTARSLVPKALEPYVTEMAQGSISSVYVTSSQGSAANGTRF
STSDFSNGSDGMFATSSNGSQYSGSRVETPVSYVGEEDDDDDDDDDDFNENDDDD
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatgctggactaattgaagccaatggagaactcaaggtttttattgaccaa
aatcttagtcctggaaaaggggttgtgtcactagtggctgttcacccttctactgttaat
actcttggaaaacagctcctgccaaaaacatttggacagtctaatgtcaacattgcacca
caagtggttattggtacaccccagaggccgtcagcaccaaatactatcctggtaggaagt
cctcacacacctaacacacactttgtatcacagaaccaggctacagattcttcgccttgg
tctgctgggaaacgaaataaaaaaggtgaaaaaaatggcaagggattaagacatttctct
atgaaagtttgtgagaaggttcagaggaaaggaaccacttcttacaatgaagtggccgat
gagctggtggcagagttcagtacaacagacaaccatatttcaccaaatgaatccgcttat
gaccagaagaatattagacgacgggtctatgatgccttaaatgtacttatggccatgaat
attatttctaaagagaagaaagaaattaagtggattggtctacctactaattctgctcag
gaatgtcaaaatttagaggtggaaagacaaagaagacttgaaagaataaagcaaaaacag
tctcagctacaggagcttattttacagcaaattgcctttaagaatctggttcagaggaat
cgtcacacagagcagcaggcaaatcggtcacctcctgccaattctgtcatacacctgcca
tttatcattgtcaacaccagcaagaagactgtgattgactgcagtatttcaaatgacaag
tttgaatacctttttaattttgacaacacttttgaaatccatgatgacatagaagtattg
aaacgaatgggaatggcttgtgggttggaatctggaagctgctccgcagaggacttgaaa
acagcacgaagcttggtgcctaaagctctagaaccatatgtgacagaaatggctcaggga
tcaatcagcagtgtgtatgtcacatcttcacaaggttctgctgcaaatggcacacggttt
tctaccagtgacttcagcaatggctcagatggcatgtttgctacaagttccaatggatca
caatacagtggctcccgtgttgagacaccagtgtcttatgttggggaagaggatgacgat
gacgacgatgatgatgatgactttaatgaaaatgatgacgatgactga
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