Geotrypetes seraphini (Gaboon caecilian): 117362449
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Entry
117362449 CDS
T09159
Symbol
PROM1
Name
(RefSeq) prominin-1 isoform X1
KO
K06532
prominin 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsh04147
]
117362449 (PROM1)
04090 CD molecules [BR:
gsh04090
]
117362449 (PROM1)
Exosome [BR:
gsh04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117362449 (PROM1)
CD molecules [BR:
gsh04090
]
Proteins
117362449 (PROM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
Cyt_bd_oxida_II
DUF745
ATG17_like
ApoLp-III
SFM1-like
Motif
Other DBs
NCBI-GeneID:
117362449
NCBI-ProteinID:
XP_033804721
UniProt:
A0A6P8RK60
LinkDB
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Position
1:247217165..247387434
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AA seq
841 aa
AA seq
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MAVTLHLLLLLVCGSTAFEMQTQYKSSASLQFGSVPAGSYGTHAYHEPGVIGLLFQIVQA
FLYLVQPHPFPEDLIRKIAQQKFGQVRIDYQKPENIVLTFQAVFYEIGFIIAAVVGLLFV
LLMPLVGLCFCMCRCCGNCGGEMHQRQKKNADCHRGCFAIFLFVASLVMSVGVLCAYAAN
QHLTNHVRGAKKLVNSNFKDLKTLINDMPVQIDYVVSQYNMTKNRAISDLNNIGPLLGCR
IQEQLMKEVRPALDAVLEIAGAIRETKEALENVTASVDLLQEGTERLQANLTDAKTNLSN
TLNDRACAHDKTVTICNSIKASLTHININANFSGLPDVSLQLASVNDVLKTDLANLVHKG
YAALNDTPELVQNQTKNIKSDINNIFDSIGSNITSFSKVLPLRHLLSNLTVHLSQSETYI
RNYFPVVEQYDFYRWLGFLVLCCMVVLILVFYYLGLLCGVCGYEKYASPTTRGYISNTAG
IFLMAGVGFSFIFSWILMIIVVVTFIAGGNIEKLVCEPFADRALFKVLDTPYLINSQWRN
YLSGILLQNPNINLTFEKVYSDCKDNKGIYTALQMNNLFNISGLLNISMYTEDIYELFEK
LNIHLSNIILLDEKGKQNLQNFSSLGIDEIDFAAFLDETSKNVTKVDLLAYANSLETSAQ
ELPKGALENALKGHANIIRLIHLQLVLPLEQGMKYVKARNILNESIRLLQRTAPDLQGKI
TEVIASVDAAQTLIQKNASSVVIQETKKYTETIIDYFVQYIEWAKNSISRDIATCKPITN
FIDTAVDVFLCSYLIDSVNTFWFGLGAATIFLIPSIIFAVKLAKFYRRMDTEDVYDDGVE
V
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcacgttgcacttgttgctgctgttggtttgcggaagtaccgcttttgaaatg
caaactcagtacaaatcgtctgcaagtctgcaatttggttcggtacctgctggaagttat
ggcacacatgcataccacgaaccgggagtgattggattattgttccagatagtccaggct
tttctctatttagtacaaccacatccttttccagaagatctcatccgaaaaatagcacaa
caaaagtttggacaagtgcgcatagattatcaaaagccagaaaatattgtcctgacattt
caggctgtcttttatgagattggatttattattgctgcggttgttggactgctgtttgtt
ctgttaatgccattggtgggtctgtgcttttgcatgtgtcgctgctgtggtaactgtgga
ggagaaatgcatcagcgacagaagaagaatgcagactgtcacagaggatgctttgcaata
tttctttttgttgcatccttagtgatgagtgttggtgttctgtgtgcttatgctgcaaat
caacacctaactaaccatgttcgtggagcaaagaagctcgtgaacagcaacttcaaagac
ttgaaaactttaattaacgacatgccagtgcaaattgactatgtggtgagccaatataac
atgacaaagaacagagcaatatcagatctaaataacattggtcctttgcttgggtgcaga
attcaggagcaattaatgaaagaagtacgtcctgcgctagatgctgttttggaaattgct
ggagcaattagagaaacaaaggaggcattagagaatgtgactgcatctgtggacctttta
caagaagggactgagagactgcaggccaatctgacagatgcaaaaacaaatctgagcaac
acacttaatgatcgagcatgtgctcatgataaaactgtaacaatctgcaactctatcaaa
gcatcgttaacccatataaatatcaatgcaaacttcagtgggttgcctgatgtgagcctt
cagcttgctagtgtaaatgatgtcctcaagacagacctcgctaatctggttcataagggt
tatgctgcacttaatgacactccagaattagtacaaaatcagaccaaaaatattaaatca
gatatcaacaatatttttgactccattggttcaaatatcaccagcttttctaaagtgctt
cctttgcggcatctactatccaatttaacggtgcatctttctcaaagtgaaacatatatc
cgaaattatttccctgtagtggaacagtatgatttctataggtggcttggtttcttggtc
ctctgctgcatggtagtacttatcctggtcttctactatttgggcttactgtgtggagtc
tgtggctatgaaaaatatgcttcaccaacaaccagaggctacatctccaatactgcgggc
atcttcctcatggctggtgttggatttagttttattttctcatggatactaatgataata
gtggtggtcactttcattgctggaggaaacatagaaaaattggtctgcgaaccatttgcg
gacagagctttatttaaggttttggatacaccatatctaataaattcacaatggagaaac
tacctttctggtattctgcttcaaaatcccaacataaatcttacttttgaaaaagtttac
agtgactgcaaggataacaaaggcatttatactgctcttcagatgaataatcttttcaat
ataagtggtttactgaatattagcatgtacacagaagatatatatgagctgtttgaaaaa
ctgaacatacatcttagtaatataatcctgctggatgagaaaggaaaacaaaatcttcag
aatttcagttctttaggaatagatgaaatagattttgcagcttttttggatgagactagc
aaaaatgtaacaaaagtggatctcctagcctatgcgaatagcttggaaacaagtgctcaa
gaattgccaaaaggagcactagaaaatgctttaaaaggacacgcaaatattattcgactg
atacaccttcaacttgttcttccactggagcaaggcatgaaatatgttaaagctaggaac
attttaaatgagagcattcgattactacaaagaacagctccagatctccaggggaaaatc
acagaggtgattgcttctgttgatgcagctcagacactcatacagaaaaatgcctcatct
gttgtcatccaggaaacaaagaagtatacagaaacaattatcgactattttgtacagtat
atcgaatgggctaaaaattctatttccagggacatagcaacatgcaagcccatcaccaac
ttcatagatactgcagtagatgtctttttatgcagctatttaatagactctgtgaacacc
ttctggtttggtttgggagccgctaccatcttccttattccttccataatctttgctgta
aaactagccaaattctatcgaagaatggatactgaagatgtatatgatgatggagtggaa
gtgtga
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