Geotrypetes seraphini (Gaboon caecilian): 117362458
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Entry
117362458 CDS
T09159
Symbol
TIA1
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117362458 (TIA1)
03041 Spliceosome [BR:
gsh03041
]
117362458 (TIA1)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117362458 (TIA1)
Spliceosome [BR:
gsh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117362458 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Calcipressin
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
117362458
NCBI-ProteinID:
XP_033804744
UniProt:
A0A6P8R400
LinkDB
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Position
6:207770428..207857668
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AA seq
386 aa
AA seq
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MDDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKSCKMIMDQTAGNDPYCFVEFYEHRHA
AASLAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSSVVSTLRSQDHFHVFVGDLSPEIST
EDIKSAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRT
NWATRKPPAPKSTFESNAKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSLFGQ
IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMLNPVQQQNQ
IGYPQPYGQWGQWYGNTQQIGQYVPNGWQVPAYGVYGQTWNQQGFNQTQSSPAWMGTNYG
VQPAQGQSASMIANQTGYRMAGYQTQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaaatgcccaaaactttgtatgtagggaatctttcaagagatgtaacggaa
gccttaattcttcaactcttcagtcagatcgggccgtgtaaaagctgtaaaatgatcatg
gaccagacagctggaaatgatccatactgttttgtggagttctatgagcaccgtcatgca
gcagcatcattagctgctatgaatggacggaagataatgggtaaggaggtaaaagtgaac
tgggcgacaactcccagcagtcagaagaaagatacaagcagtagttccgttgtcagcaca
ctgcgttcacaagatcatttccatgtttttgttggagacctcagtccagaaatttcaact
gaagatataaaatcagcatttgcaccctttggacgaatatcagatgcacgtgtggtcaaa
gatatggcaacaggaaaatcaaagggatatggctttgtttctttcttcaataagtgggat
gcagagaatgccatccagcaaatgggtggccagtggcttggggggagacaaatccgaaca
aactgggcaacacgaaaacctccagccccaaagagtacatttgaatcaaatgccaaacag
ctatcttatgatgaggttgtaaatcagtcaagcccaagtaactgcactgtatattgtggt
ggtgttacttcaggactaacagaacaactcatgcgccaaactttctcactttttggacaa
attatggagatcagagtcttcccagataaaggatattcttttgtacggtttaattcccat
gaaagtgctgcacatgcaattgtgtctgtcaacggtactaccatagaagggcatgttgta
aagtgttattggggtaaagaaacaccagatatgctaaatcctgtgcagcagcaaaatcaa
attggatatccacagccttatggccagtggggtcaatggtatggaaatactcagcaaatt
ggtcagtatgtgcctaatggttggcaggtgccagcatatggagtttatggacagacatgg
aatcaacaaggatttaatcaaacacagtcctctcctgcatggatgggtacaaattatggt
gttcaaccagcccaggggcagagtgcaagcatgatagcaaatcagactggatatcgcatg
gcagggtatcaaacccagtga
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