Geotrypetes seraphini (Gaboon caecilian): 117362470
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Entry
117362470 CDS
T09159
Symbol
NALCN
Name
(RefSeq) sodium leak channel non-selective protein
KO
K21863
sodium leak channel non-selective protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsh04040
]
117362470 (NALCN)
Ion channels [BR:
gsh04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
117362470 (NALCN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
PsaF
DUF5914
FAM165
Motif
Other DBs
NCBI-GeneID:
117362470
NCBI-ProteinID:
XP_033804776
UniProt:
A0A6P8RK71
LinkDB
All DBs
Position
6:124446432..125576142
Genome browser
AA seq
1736 aa
AA seq
DB search
MLKRKQSSRVEAQPVTDFGPDESLSDNADILWINKPWVHSLLRICAIISVISVCMNTPKT
FEHYPPLQYLTFALDTLLMFLYTAEMIAKMHIRGIVKGDSSYVKDRWCVFDGFMVFCLWV
SLVLQVFEIAEIVDQMSPWGMLRIPRPLIMIRAFRIYFRFELPRTRITNILKRSGEQIWS
VSIFLLFFLLLYGILGVQMFGTFTYHCVTNDTQPGNVTWNNLAIPDTHCSPDGEGYQCPR
GFKCMDLKDLGLTRQELGYSGFNEIGTSIFTVYEAASQEGWVFLMYRAIDSFPRWRSYFY
FITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMWGSRSSTTSTATTQMFHEDAAGGWQL
VAVDMNKPQGRAPACLQKMMRSSIFHMFILSMVAVDVIVAASNYYKGETFKRQYDEFYLA
EVAFTVLFDLEALLKIWCLGFTGYISSSLHKFELLLVVGTTLHIYPDLYHSQFTYFQVLR
VVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTFP
RAFMSMFQILTQEGWVDVMDQTLNAVGHMWAPVVAIYFILYHLFATLILLSLFVAVILDN
LELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISKLPSDFTVPKIRES
FMKQFIDRQQQDTSCLLRRLPSASSSSCDHSKRSGIEENKYIDQKLRKSVFSIRARNLLE
KETAVSKILRACTRQRMLSGSFEGQPAKERSILSVQHHIRQERRSLRHGSNSQRISRGKS
LETLTQDHSSTVRYRNAQREDSEIKMIQEKKEQAEMKRKVQEEELRENHPYFDKPLFIVG
REHRFRNFCRVVVRARFNASKTDPVTGAVKNTKYYQLYDLLGLVTYLDWVMIVVTICSCI
SMMFESPFRRVMHAPTLQIAEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIFI
YLVSLIFLCWMPQNVPAKSGAQLLMVLRCLRPLRIFKLVPQMRKVVRELFSGFKEIFLVS
ILLLTLMLVFASFGVQLFAGKLAKCNDPHISIREECHGIFRINLSVSRNLNLKLKPGEKK
PGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVGPIHGIYIHVFVF
LGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWEDLKSRLKIAQPLHLPPRPDNDGFRA
RMYDITQHPFFKRTIAVLVLAQSVLLSVKWDVDEPVTVPLATMSVVFTFIFVLEVTMKIA
AMSPAGFWQSRRNRYDLLVTSLGVIWVILHFALLNEYTYMMGACIIVFRFFSICGKHVTL
KMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSSAGKAITV
LFRIVTGEDWNKIMHDCMVQPPFCTPDNSRYWETDCGNYAGALMYFCSFYIIIAYIMLNL
LVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNMVDDKREGVIPTFRVKFLLRLLRGRL
EVDLDKDKLLFKHMCYEMERLHNGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLEY
TIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHSLRESQQQELSRFLNPPSIETTQPSE
DMNTNNQDNTQPETSSQQQLLSPTLSDRGGYRQDSTEAGKPQRKFGQWRLPSAPKPLSHS
VSSVNLRFGGRTTMKSVVCKMNPMLDVASSGSEVKKWWTRQLTVESDESGDDLLDM
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgaaagcaaagttctagggtggaagcccagccagtaacagactttggtcct
gatgaatctttgtctgataatgcagacatcctgtggattaacaagccatgggtgcactcc
ttgttacgcatttgtgccatcatcagtgtcatttccgtttgtatgaacactccaaagaca
tttgagcattatcctccgcttcagtacctgacctttgcactggatactctgttgatgttt
ctttatactgcagagatgatagccaaaatgcacatccgtggcatagttaagggtgacagc
tcctatgttaaggatcgttggtgtgtatttgatggattcatggtattttgtctttgggtt
tcattagttttacaggtatttgaaattgcagaaatagttgatcagatgtctccctggggc
atgttaaggattccaagacctcttattatgatccgagctttccgtatttattttcggttt
gagctaccaagaacaaggataacaaacattttaaaacgttctggagaacaaatctggagt
gtttccatttttctcctcttctttctacttctatatggcattcttggtgtccagatgttt
ggaacttttacatatcactgtgttacaaatgatactcagccaggaaatgtgacctggaac
aatttagctattccagatactcactgttcaccagatggagaaggatatcaatgtccgcga
ggctttaagtgcatggatcttaaagatctgggacttacaaggcaagaactgggctacagt
ggctttaatgagataggcacaagcatatttactgtgtatgaagcagcatctcaagaaggt
tgggttttccttatgtatagagcaattgacagttttcctcggtggcgctcctatttctat
tttatcacactaatcttctttcttgcatggcttgttaagaatgtgttcattgcagttatt
attgagacatttgctgaaataagagtacagttccagcagatgtgggggtccagaagcagt
actacatcaacagcaactacacagatgtttcatgaagatgctgctgggggatggcaacta
gtagcagttgatatgaacaaaccccaaggcagagctccagcatgtttacagaaaatgatg
agatcatcaatttttcacatgtttatactaagcatggtggcagtagatgtcattgttgct
gctagtaactactacaaaggagagactttcaagagacaatatgatgagttttaccttgct
gaggttgcatttacagttctttttgatttggaagctcttctgaagatctggtgtttagga
tttactggttatattagttcatctctccacaaatttgaattactgctggtagttggaact
actcttcatatttatccagacctctaccattctcagtttacctattttcaggtacttaga
gtagttcgactgattaaaatttctcctgccctggaagattttgtctacaagatctttgga
ccaggaaaaaagcttggaagtttggttgtattcacagccagccttttaatagtaatgtca
gcaattagtttacagatgttttgttttgttgaagaattggacagatttacaacttttccc
agggcatttatgtcaatgttccagatccttactcaagaaggatgggtagatgtaatggat
caaactctcaatgctgtaggacatatgtgggcccctgttgttgctatatactttatcctc
tatcatctctttgctacactgattttattaagtctctttgtggctgttattttggacaat
ttggaacttgatgaagatttaaagaaactcaaacagcttaaacaaagtgaagcaaatgca
gataccaaggaaaaattacctctacgactacggatctttgagaaatttcccaatcggcca
caaatggtgaaaatatctaaactgccatctgacttcacagttcccaaaataagggaaagt
ttcatgaaacagtttattgaccgtcagcagcaggatacaagctgcttgctccgaagacta
ccttcagcatcttcttcttcatgtgaccattcaaaaaggtctggtattgaagaaaacaaa
tatattgatcaaaagcttcgtaaatcagttttcagcatcagggcaagaaatcttttggaa
aaagaaacagcagtcagtaaaatcttgagggcctgtacaagacaacgcatgctgagtgga
tcatttgagggacaacctgccaaagaaagatcgatacttagtgtgcagcatcatatacgt
caagagcgaagatctctaagacatggttcaaatagtcagagaatcagcaggggaaaatct
cttgaaaccctgacacaagaccactccagtacagtaagatacagaaatgcacagagagaa
gatagtgaaataaaaatgatccaggaaaaaaaagaacaggctgaaatgaagaggaaagtg
caagaagaagaattacgggagaatcacccatattttgataaaccacttttcatagttggc
cgtgagcaccggttcagaaacttttgtcgagttgttgttcgagctcgctttaatgcctct
aaaacagatccagtcactggagcagtgaaaaacaccaaatattaccaactatatgattta
ttaggcttggttacatacctcgactgggttatgatcgttgttacaatctgttcctgtata
tctatgatgtttgaatcacctttcagaagagttatgcatgcacctacattacagattgct
gaatatgtatttgtgatattcatgagcattgagcttaatctgaagataatggcagatggt
ctatttttcactccaacagcagtcatacgagattttggaggtgtaatggacatttttata
tatcttgtaagtttgatcttcctatgctggatgccccagaatgtccctgctaaatctggt
gctcaacttctgatggttctgcgatgtctcagacctcttcggattttcaaactagtgcct
cagatgaggaaagttgtaagagaattgttcagtggcttcaaggaaatctttttggtctct
attcttttactgaccctgatgcttgtttttgcaagttttggagttcagctgtttgcagga
aaactggctaagtgcaatgatcctcacattagtattagggaagagtgtcatggtatattt
agaattaatctcagtgtttcaagaaatttaaacttgaagctaaagcctggagaaaaaaag
ccaggattctgggtgcctcgtgtctgggcaaatcctcggaacttcaactttgacaatgtg
ggaaatgctatgttggcgctctttgaagttctttctttaaaaggctgggtggaagtcaga
gatgttatcattcatcgtgtggggccgatccatggaatctatatccatgtgtttgtattc
cttggatgcatgattggactgaccctttttgttggtgttgtcattgcaaatttcaatgaa
aacaagggtacagctttgttgactgtagatcaaagaagatgggaggatcttaaaagcagg
ctgaagatagcacaaccccttcatctaccacctcgtccagataatgatggatttagagca
agaatgtatgatattactcagcatccattttttaagaggacaattgctgtacttgttctg
gcccagtctgtgttgttgtcagtaaagtgggatgttgatgaaccagtgactgttcctcta
gcaacaatgtccgttgtcttcacattcatttttgttcttgaggttacaatgaagattgct
gccatgtcacctgcgggattttggcaaagtagaagaaatcgatatgatctcctggtaacg
tcccttggtgttatctgggtgatacttcattttgcattactgaatgaatatacctatatg
atgggtgcgtgcattattgtcttcagattcttttcaatttgtggaaaacatgtgacacta
aagatgcttctcttgactgtagtagtcagcatgtacaagagtttcttcatcatcgttggg
atgtttttgctgctgctttgttatgcttttgcaggagttgtgctatttggcacggtgaaa
tatggcgagaatattaacaggcatgcaaatttttcttcagctggaaaagccattactgta
ctttttagaattgtgacaggtgaagactggaacaagattatgcatgactgcatggtacaa
cctcctttttgtactccagataacagtaggtactgggaaacagattgtgggaattatgca
ggagcacttatgtatttctgttcattttatatcatcattgcatacattatgctaaatttg
cttgtagctataattgttgaaaacttttcactgttttattctactgaagaagatcagctt
ctcagctataatgatcttcgccattttcaaattatttggaatatggttgatgataaaaga
gagggggtgatccctactttccgtgttaagtttctgctgaggctgctacgtgggagattg
gaggtagacctggataaggacaagcttttattcaaacacatgtgctatgaaatggagaga
ttgcacaatggtggagatgttacttttcatgatgtattgagtatgctttcatatagatct
gtggatattcgaaaaagtcttcagctagaggagctccttgctagggaacaattagaatat
acaatagaagaagaagtagccaagcaaacaatacgcatgtggctgaaaaagtgcttgaaa
cgtatccgagcaaaacaacaacaatcatgtagcatcattcacagtcttcgagaaagtcag
caacaagaactgagtaggtttctgaatcctcccagtattgaaacaacacagccaagcgag
gatatgaatactaacaatcaggacaacacacaaccagagacaagcagccagcaacagttg
ctcagcccaactctttctgacagaggtgggtatcgtcaagactctacagaagctggaaaa
ccccaaaggaaattcggacagtggcgtttaccatcagcaccaaaacctctcagccattct
gtgtcttctgtcaacttgcggtttggaggtcgtacaactatgaagtctgttgtatgcaag
atgaatcctatgttagatgtggcttcctctgggtcagaggtgaaaaagtggtggacaagg
caactaactgtagagagtgatgaaagtggtgatgatcttcttgacatgtaa
DBGET
integrated database retrieval system
