Geotrypetes seraphini (Gaboon caecilian): 117362616
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Entry
117362616 CDS
T09159
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03030
DNA replication
gsh03410
Base excision repair
gsh03420
Nucleotide excision repair
gsh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117362616 (RFC3)
03410 Base excision repair
117362616 (RFC3)
03420 Nucleotide excision repair
117362616 (RFC3)
03430 Mismatch repair
117362616 (RFC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsh03032
]
117362616 (RFC3)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117362616 (RFC3)
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117362616 (RFC3)
DNA replication proteins [BR:
gsh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117362616 (RFC3)
DNA Replication Termination Factors
ELG1-RFC complex
117362616 (RFC3)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117362616 (RFC3)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117362616 (RFC3)
Check point factors
HRAD17(Rad24)-RFC complex
117362616 (RFC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
ABC_tran
Sigma54_activ_2
AAA_11
DUF2247
AAA_2
ATPgrasp_ST
Prenyltransf
AAA_24
Motif
Other DBs
NCBI-GeneID:
117362616
NCBI-ProteinID:
XP_033805142
UniProt:
A0A6P8R5D3
LinkDB
All DBs
Position
6:52632586..52683896
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPSALGKLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQELLKTVAQSQQ
LETSTQRDFKVVVLTEVDKLTKDAQHALRRTMEKYMANCRLILCCNSTSKVIPPIRSRCL
AVRIPAPSIDDICHVLSSVCKKEGLMLPQDLSRRLAEKSGRNLRKALLICEACRVQQYPF
SLDQDIPETDWEVYLRETANTIVSQQTPQRLLEVRGRLYELLTHCIPAEIIMKGLLTELL
NNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMAIYKKFMEDGLDAMIF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctgggtggataaataccggccgagcgcccttgggaagctggattaccacaag
gagcaagcggcccagcttcggaatctggtgcagtgtggtgactttcctcatcttttagtg
tatggcccatcaggtgctggaaagaagaccagaataatgtgtttactgcgagaattgtat
gggccaggcgttgaaaagctgagaattgagcatcaaactataacaacaccatctaaaaag
aaaattgaaattagcactattgcgagcaactatcatttggaagttaacccaagtgatgct
ggaaacagtgaccgggtagtaattcaggaattgttaaagacagttgcccaatctcaacaa
cttgagacaagtactcaaagagattttaaagtggtggtgttgacagaagttgacaaactt
acaaaagatgctcagcatgccttaagaagaaccatggagaagtacatggctaattgcagg
ttgattctatgctgcaattccacctctaaagtcatcccgcctattcgaagtagatgtcta
gcagtgaggattcctgctcccagcattgatgatatttgtcatgttttatccagtgtgtgt
aagaaagaagggttaatgcttcctcaggatctttctcgcagacttgcagaaaaatctggc
agaaatctcagaaaagcactgctgatttgtgaggcttgcagagtacaacagtatccattt
tctttagaccaagacataccagaaacagactgggaggtgtatctgagagagactgccaat
actattgtcagtcagcagacaccacagaggttgcttgaagttcgtggacgactttatgaa
cttttaacccactgtattcctgctgaaataataatgaagggacttttgacagagcttcta
aataactgtgatggacagctgaaaggagaagttgcacagatggctgcatattatgaacac
cgcttacagcttggcagcaaagcaatttatcacctggaagcatttgttgctaagttcatg
gctatttataagaagtttatggaggatggactagatgccatgattttctaa
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