Geotrypetes seraphini (Gaboon caecilian): 117362721
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Entry
117362721 CDS
T09159
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like isoform X1
KO
K12015
tripartite motif-containing protein 39 / bloodthirsty-related gene family protein [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117362721
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117362721
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117362721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_6
zf-RING_10
Prok-RING_4
DASH_Dad4
TRAF3_RING
Sina_RING
4HB_MCP_1
TFIIE_alpha
U-box
Apolipoprotein
Opiods_neuropep
NEPRO_N
Serine_rich
FUT8_N_cat
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
117362721
NCBI-ProteinID:
XP_033805468
UniProt:
A0A6P8RIQ5
LinkDB
All DBs
Position
6:complement(5184512..5207459)
Genome browser
AA seq
485 aa
AA seq
DB search
MAAANPAQTLREGVSCSLCLDYFTDPVMTDCGHNFCRSCITQAWEGRDPDSPCPQCRKRS
HQRNLRPNRQLAHITEMVKNLCQTSVKPKEENRCEKHAEKLELFCEEDQKMICLICRESQ
DHISHTVIPIEEAEQEYKEKLKMHLEPLRKNLEDLLQFKSAEGKKAEELRSETEIKRQKV
ETEFEELHQFLNKEKQVLLSRLEEEEKKILQRIRENVSQLKEQSSSLTQLISEIEEKRQQ
PDAELLKDVKDALRRCHKMKFPEPKAVSTDLKMGFGLSYPQQLKKLITKFGGLDWWMEYN
RYGVNVTLDSKTTHPRLVLSEDQKSVRQEDTRQNLLNNPERFDHFHCVLGCEGFTSGRHY
WEVEVGDNSGWIVGVCKDSVRRKGELTLSPGEGFWTVELSYLLGYMALTSPEIQLPLSER
PWAVGILLDFEAGKVSFYNADNKSHLFTFTDTFTGKLRSFFSTYSKAPLRICHVPAWKLN
CRVPN
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcaaacccggctcagactctccgagaaggagtttcgtgctctctctgtctg
gattattttacagatccagtgatgacagactgtggacacaacttctgccgctcctgcatc
actcaggcctgggaggggagagacccggactccccctgtccccagtgcaggaagagatct
catcagaggaacctcagaccaaacaggcagctggcacatattacagaaatggtgaaaaat
ctctgtcagacttcagtgaaaccaaaagaggagaatcggtgtgagaagcatgcagagaaa
ttggaattgttctgtgaagaggatcagaaaatgatctgcctgatttgtagagagtcccag
gatcacatatctcacaccgtgatcccgatagaggaggctgagcaggaatacaaggagaaa
cttaaaatgcatctggagcctctgagaaagaatctggaagatcttctgcagtttaagtct
gccgaagggaagaaagctgaagagctgaggagtgagacggagatcaaaagacagaaagtg
gagactgagtttgaagagttgcaccagtttctgaataaggagaagcaggtccttctctcg
agactggaggaggaagagaagaagattctccagagaatcagggaaaatgtcagccagcta
aaagagcaaagctcctccctcacgcagttgatctccgagatagaggagaagcgtcaacag
ccggatgccgaattactgaaggatgtgaaggatgccctgagaaggtgtcataaaatgaag
tttccagaaccaaaggctgtttctactgatctgaaaatgggttttggtttgagctaccct
cagcagctaaagaaactgattactaaatttggaggacttgattggtggatggaatataac
agatatggagtaaatgtgactctggattcgaaaactactcatcccaggctcgtcctgtct
gaggatcagaaaagcgtcagacaggaagacacaagacagaatctgctgaacaatcccgag
agatttgatcattttcactgtgtgctggggtgcgagggcttcacctcggggagacattac
tgggaggtggaggtgggggataattctggctggatagtgggagtgtgtaaagactccgtg
aggcggaagggggagctcacgctttcgcccggggagggattctggactgtggagctgtct
tatctacttggctacatggccctcacctcccccgagatccagctccccctgagtgagaga
ccctgggcagtggggattctgctggactttgaggctggaaaagtctcgttttacaatgcg
gacaacaaatctcatctcttcaccttcaccgacaccttcaccgggaaactccggtctttc
ttcagtacctattctaaagctcctctgagaatctgtcatgtgccagcctggaaattaaac
tgcagggtgccaaattga
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