Geotrypetes seraphini (Gaboon caecilian): 117362750
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Entry
117362750 CDS
T09159
Symbol
PLAT
Name
(RefSeq) LOW QUALITY PROTEIN: tissue-type plasminogen activator
KO
K01343
tissue plasminogen activator [EC:
3.4.21.68
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117362750 (PLAT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gsh01002
]
117362750 (PLAT)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gsh00536
]
117362750 (PLAT)
Enzymes [BR:
gsh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.68 t-plasminogen activator
117362750 (PLAT)
Peptidases and inhibitors [BR:
gsh01002
]
Serine peptidases
Family S1: chymotrypsin family
117362750 (PLAT)
Glycosaminoglycan binding proteins [BR:
gsh00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
117362750 (PLAT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
fn1
EGF
DUF1986
Motif
Other DBs
NCBI-GeneID:
117362750
NCBI-ProteinID:
XP_033805546
UniProt:
A0A6P8RKM5
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Position
6:complement(223853919..223936220)
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AA seq
552 aa
AA seq
DB search
MDIGFLYFLLLAGAVSSSAYKTFLLRQKRGTRPLVVTCKENSSSTIYQQGETWLRPSGRR
LEYCRCEDRQPQCHTVPVIDCIEKMCYNGGRCRQALYFPDFYCYCQRGFTGKQCEIDALT
TCYQDSGETYRGTWNVGESGATCLNWKLRSLAQKRYNAWRRDAALLGLGNHNYCRNPDKD
SKPWCHVFKGNQYTWEYCSTPACSKVSGDVCYTDQGTKXRSHSVTLSWQNLSTVGFPKGP
YKVYTAWKLYARQLGLGSHNHCRNPDNDTQPWCHVLEGAESSWEYCSVPKCSTCGLRQPK
QALYRIQGGFLTDISSHPWQAAIYIKYRTVVGEYFLCGGTLISSCWVLSAAHCFEERFGL
NRIKVVLGRTYRAKPSENEQQFRIEKYFLHKDFDSETYDNDIVLLKLKSETDQCAVETET
TRIACLPKPELKLPDWTECEISGYGKQEESDYFFSEAIKEGLVRLVPASKCTSAQLQNKT
VTENMLCALDTRNIDDACKGDSGGPLMCPDNGRMHLMGIISWGIGCGQKDIPGVYTKVSR
YLSWIENIMKMQ
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggatatcggattcctttattttctcctgctggcgggagctgtttcttcttctgcctat
aagacttttcttcttcgtcagaaacgtggaacaaggcctctcgtagtcacttgtaaagaa
aactcttcctctacaatttaccagcaaggggagacatggctacgtccttctggtcgtcgc
ttggaatactgcaggtgtgaagatagacagccccagtgccacactgtacctgtcatagat
tgtatagaaaagatgtgttacaatggaggacgctgcagacaggctctttacttccctgat
ttttattgctattgtcaaagaggctttactgggaagcagtgtgaaatagatgcattgacg
acctgttaccaggactctggggaaacatacagaggaacctggaatgttggtgaaagtgga
gccacgtgtttaaactggaaactgaggtccctggcccagaaacggtacaatgcctggaga
cgagacgcagctctgctgggactaggaaatcacaattattgcagaaatccagacaaggat
tcaaagccctggtgtcatgtcttcaaaggaaatcagtatacctgggagtactgcagcact
ccagcatgctctaaggtttcaggtgatgtttgctatacagaccagggcaccaaatagaga
agccacagcgtcaccctctcatggcagaacctgtctacggtgggattcccaaagggtccg
tataaagtctatacagcttggaagctgtatgctcgacagctgggtcttggaagtcacaac
cactgccggaatcccgacaatgatacacaaccctggtgccacgtccttgagggtgcagaa
tcatcttgggaatattgctctgtgcctaagtgctctacgtgtggcttgagacagcctaaa
caggctctctatcgaatccaaggaggttttctcacagacatcagctcccatccgtggcag
gcagccatttatatcaaatatcggacagtggtaggggaatacttcctgtgtggaggcact
ctgatcagctcctgttgggtgctatctgcagcccactgctttgaagaaaggtttggcttg
aatcgaataaaggtggtactgggaaggacttacagagcgaaaccttcggaaaatgaacaa
cagttcagaattgagaaatatttccttcacaaggattttgattcagaaacctatgacaat
gatattgttttgttgaagctgaagtcggagacggaccagtgtgctgtggagacggagacc
actcgtattgcatgccttccaaaaccagaactgaagctccccgattggacggagtgtgag
atctctggctacggaaagcaagaggaatctgactattttttctcagaggcgataaaggaa
ggtcttgtcaggctggttcctgcgagcaagtgcacctcagcccagctgcagaataaaacg
gtgactgaaaacatgctctgtgctttggacactcgcaatatagatgatgcctgcaagggt
gactctggagggccactgatgtgtccagacaatggtaggatgcacctaatgggtatcatc
agctggggcattggctgtgggcagaaggacatacctggcgtttatacaaaagtgagtcgt
tacctgagctggattgagaacatcatgaagatgcagtga
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