Geotrypetes seraphini (Gaboon caecilian): 117362845
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Entry
117362845 CDS
T09159
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117362845 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117362845 (USP39)
Spliceosome [BR:
gsh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
117362845 (USP39)
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
FerA
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
117362845
NCBI-ProteinID:
XP_033805785
UniProt:
A0A6P8RAI5
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Position
6:183578731..183679256
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AA seq
500 aa
AA seq
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MTSVRVKWKRVMEEDDDDDDDDEVSVKYGRFEPEDRRSRHCPYLDTINRSVLDFDFEKLC
SISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEIIDS
SLEDITYVLKPTFTKPQITHLDKQAKLCRAYDGTTYLPGIVGLNNIKANDYANAILQALS
NVPPLRNYFLEEENYRGIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVV
LCSKKTFQITKQGDGVDFLSWFLNALNLALGGTKKRKTIVTDVFQGSMRIFTKKLPHPDL
PAEEKEQLLLNEEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFSILAKFNGI
AEKEYKTYKENFLKRFQLTKLPSYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLS
EEAQNVHKHTTYDLVANIVHDGKPNEGAYRIHVLHHGTGKWYELQDLQVTDILPQMITLS
EAYIQIWKRREDDETNQQGA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgtgcgggtgaagtggaaacgggttatggaagaggatgatgacgacgacgac
gatgatgaggtttcagtgaagtatggcaggtttgagcctgaagatagacggagcagacat
tgtccgtacttggataccatcaacaggagtgttctggactttgactttgaaaaactgtgc
tccatctccctctcgcatattaatgcctatgcctgcttggtgtgtggcaagtacttccaa
ggtcgggggttgaagtctcatgcctacatccacagtgtccagtttagccaccatgtcttc
ctcaacctgcacaccctgaagttctattgtttaccagataactacgagatcattgactct
tctttagaggatatcacgtatgttttaaagccaacattcacaaagcctcagatcacccac
ctggacaaacaagcaaaactctgcagagcctatgatggcaccacctatctaccgggcatt
gtgggattgaacaatatcaaggccaacgattatgccaatgcgatactccaggcgctctcc
aatgtacctccactgcggaattattttctggaggaggagaattaccgtggcattaagcgt
cctcctggagacattatgttcttgctggtgcagcggtttggggagctgatgagaaaactc
tggaatccccgaaacttcaaggctcatgtatcaccccatgagatgctgcaggcagttgta
ctatgcagcaagaagacttttcaaatcacaaagcaaggggatggagttgacttcctctct
tggtttctcaatgctttgaatttggcccttggagggacgaaaaagagaaaaacaattgtg
acagatgtgttccaaggatccatgcgcatattcaccaaaaagcttccacacccagatctg
cctgcagaagaaaaggagcagctattgctcaatgaggagtatcaggagacaatggtagaa
tccacattcatgtacctgaccctggacctgcccactgccccactatacaaggatgagaag
gaacaactcatcatcccacaagtgccactcttcagcatcttggccaaattcaatggaatc
gcagaaaaggaatacaaaacttataaagagaattttctgaagcgcttccagctaaccaag
ctgccttcatacctgattttctgcatcaaacgtttcaccaaaaataacttctttgtggag
aagaatccaacaattgtcaactttcctatcacaaatgtggacctgcgggagtacctctct
gaggaagcacagaatgtgcacaaacataccacctatgatctagttgccaacatagtgcat
gatgggaaacccaatgagggagcctatcgtatccatgtactgcaccatggtactggtaaa
tggtatgaattgcaggacctgcaggtaacagatatcttaccccagatgatcaccctctct
gaagcatacatacagatctggaagaggcgagaagatgatgaaacaaaccagcagggagca
tga
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