Geotrypetes seraphini (Gaboon caecilian): 117362866
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Entry
117362866 CDS
T09159
Symbol
SORCS2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117362866 (SORCS2)
Membrane trafficking [BR:
gsh04131
]
Protein recycling
Others
Others
117362866 (SORCS2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
117362866
NCBI-ProteinID:
XP_033805831
UniProt:
A0A6P8RAK5
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Position
1:256780311..258043744
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AA seq
1113 aa
AA seq
DB search
MVLEGAPRRLPPAGTLPLLLLLLGPCQLPVSPGRFGRAAAAAGERLALLSTSFVLRGDAS
HNQAMVHWTGENSSVILILTKFYHADMGKVLESSLWRSSDFGTSYTKLNLQPGINTVIDN
FYICPANKKKIILVSSSLSDRDQTLFTSTDEGATFQKQPISFSVETLTFHPKEEEKLLAY
SKDSKLYVSMDLGKKWILLQEHVTKDHIFWAVAGVDTDSDLVHMEIQDTNGGFRYITCQI
QNCSDRTLNVRFAGSIDWNSLTVQDDYAFVKVSSENQTKYYVSYRRNGFVQMKLPKYALP
KDLQVISTDENQVFVAVQEWYQMDTYNLYQSDPQGVYYSLVLENVRSAKQPEENVLIDIL
EVRGVKGVFLANQKIDGKVTTLITYNKGRDWDYLAPPTMDMNGKPTNCKPPDCHLHLHLR
WADNPYVSGTVHTKDTAPGLIMGAGNLGSQLVEYKEEMYITSDCGKTWRQVFEEEHHILY
LDHGGVIVAIKDTSIPLKILKFSIDEGQTWSTHNFTSTPVFVDGLLSEPGDETLVMTIFG
HISFRSDWELVKVDFRPTFSRECTEDDYDSWNLTTLQGEHCIMGQQRSFRKRKMLSWCIK
GKSFTSALTSKICWCTNSDFMCDYGFERAAPLKSESNMCFADFWFNPDSPPDDCMLGQAY
TRSTGYRKAVSNVCEGGVDMQQSPAQFQCPLIAPKGLHVTIKGDTLAVKPGEDITFIIRQ
EQGDVLNTKYQVDLGDGFKAIYVNLTLTGEPIRHRYENPGIYSVSVKADNVAGHDEAVLF
VQVNSPLQVLYLEVVPVVGRNQEVNLTAILKPRNANLTVFYWWIGNNLQPELSLDSFLVT
KFSEAGEVRVAVQASCGNSMLQDSKIVRVLDQFQVLSLKFTTHLDMYNPNVPEWREDIGL
IVTRLLAKETNIPEETLLTVVKPGLPTTADLYVIPPTNKPKRKRSIASDKRISAIKQALN
AHNISFFLRGGFSVLVTLSDSEYDSQRIGGGGGYWAIVVIFAVCLVAVGAFILYKFKRKV
PGRTVYAQMHNEKEQEMTSPVNHSEDTQNIIQGEEFIDDDMDTQTLGNARGLELIKCARP
CLQTRCLHFAEHGSTVQDGLQQERLHESSEIIS
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggagggggccccccgccgccttccccccgcggggaccctgcccttgctcctg
ctcctgctcgggccctgccagctgcctgtctccccggggcgcttcggaagagcagcggct
gctgccggggagcggctcgcgctgctcagcacctcgttcgtgctccggggggacgcgtcg
cacaaccaggcgatggtgcactggaccggcgagaacagcagcgttattctgatacttaca
aagttttaccatgctgatatgggaaaagtgctggaaagctccctatggcggtcctcagac
tttgggacttcgtacacaaaactaaatttgcagcccgggatcaatacagtcattgacaat
ttctatatctgtccagccaacaaaaaaaagatcattcttgtcagttcttcgctcagtgac
cgggaccagaccctctttacaagcactgatgaaggagcaacttttcaaaagcagcccatt
agcttctcggtggaaactctaactttccatccaaaagaggaggagaagctgctcgcctat
agcaaggattctaagctatatgtgtcaatggacctaggaaagaaatggatacttctccaa
gagcatgtgacaaaagatcatatattctgggctgtagctggagttgatacagattctgat
ttggtgcatatggaaatccaggataccaatggaggttttcgttatatcacctgtcagatt
cagaactgctctgatagaacactgaacgtccggtttgccggcagtattgactggaattcc
ttgactgttcaagatgattatgcctttgtaaaggtatcatcagaaaatcagaccaaatat
tacgtgtcttaccgtcgaaatggttttgtacagatgaaacttccaaagtatgccctgcca
aaagacttgcaggttatcagcacagatgaaaatcaagtctttgtggctgttcaagaatgg
taccagatggacacttacaacttgtatcagtctgacccacagggagtctactactccctt
gtactggagaatgtcagaagtgcaaagcagcctgaagaaaatgtcctcattgatatttta
gaggtcagaggagttaaaggagtctttttggccaatcaaaaaattgatggaaaagtgact
actcttatcacctacaacaaaggtcgtgactgggactatctggctccacccactatggac
atgaatggcaaaccaaccaattgcaaacctcctgattgtcatcttcacctccacctccgc
tgggcagacaatccctacgtgtcaggaacagttcatacgaaggatactgcaccaggcctc
ataatgggggcaggtaatttgggctcacaattggttgagtacaaggaagaaatgtatatc
acatcagactgtgggaagacttggagacaggtgtttgaagaagagcatcacatcttgtat
ctggatcatggtggagttattgtggccatcaaagacacgtctatccctctgaaaatactc
aagttcagcatcgacgaaggccaaacttggagcactcacaactttaccagcactccggtc
tttgtggatggattgctcagtgagcccggggatgaaactcttgtaatgacaatctttggt
catatcagtttccgttcagactgggaactagtgaaagtagatttcaggccgaccttttcc
agggaatgtaccgaagatgactatgactcttggaatctcaccaccttacagggggagcac
tgtatcatgggacagcagagaagtttccggaagaggaagatgttatcatggtgcatcaaa
ggcaagagcttcacgtcggcactcacatccaaaatctgctggtgtacaaactctgatttc
atgtgtgattatgggtttgagcgtgcagcacctctgaagtcagaatccaacatgtgcttt
gctgatttttggtttaacccagattccccacctgacgactgcatgttgggacaggcatac
actagaagtacaggatatagaaaagctgtttcgaatgtgtgtgagggaggggtggacatg
cagcagagtccagcccagttccagtgccccctgattgctccaaaggggttgcatgtgacc
attaaaggagatacactggctgtaaaacccggagaagacatcactttcatcatccggcag
gagcagggtgatgttctgaatactaagtaccaggtggatctaggagacggcttcaaagct
atttatgtgaacctcacgttgacaggtgaacccatccggcaccgctacgagaacccgggg
atttacagtgtctctgtcaaggcggataatgttgctggacacgatgaggctgtgctcttt
gtccaggtgaactctcctctacaggttctgtaccttgaagtggtgccagttgttggcaga
aaccaagaagtgaatctgacagccattttaaagcctaggaatgccaacctaacagtcttc
tactggtggattggaaacaatttacagccagaactatcattggacagttttttggtgaca
aagttttctgaggctggtgaagttcgggtcgcagtccaagcatcatgtgggaattccatg
cttcaggactccaagatagttcgagtcctagatcagtttcaagttctttcactaaaattt
acaacgcacctggatatgtacaatcccaatgttccagaatggagggaagacataggtttg
attgttacacgacttcttgcaaaggaaactaatattcctgaagaaacacttttaacggtg
gtgaaaccaggcttgcccacaacggctgatttgtatgtgattccaccaacaaataaacca
aaaaggaagagaagtatagctagtgacaagagaatatcagctataaagcaagctttgaat
gcacacaacatcagcttctttctgagaggaggattttcagtgttagtgacattgtctgac
tctgaatacgattcccaaaggatcggaggaggtggtggatactgggctattgtagtcatc
tttgctgtctgtttagtagcagtgggagcattcatcttatataaatttaaaaggaaagtg
cctggcagaactgtctatgctcagatgcacaatgagaaggaacaagagatgacaagccct
gttaatcacagtgaggacacacagaatatcattcagggtgaagagttcattgatgatgat
atggatacgcaaacactaggtaacgcaagaggcctagagctaataaaatgtgcaaggccc
tgtttgcagaccagatgccttcactttgctgagcatgggagcacagttcaagacggttta
caacaagagagactgcatgaaagcagcgaaattatatcatga
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