Geotrypetes seraphini (Gaboon caecilian): 117363083
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Entry
117363083 CDS
T09159
Symbol
RUNX1
Name
(RefSeq) runt-related transcription factor 1
KO
K08367
runt-related transcription factor 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117363083 (RUNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117363083 (RUNX1)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
117363083 (RUNX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
117363083
NCBI-ProteinID:
XP_033806240
UniProt:
A0A6P8RLJ5
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All DBs
Position
6:complement(231632628..231779419)
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AA seq
457 aa
AA seq
DB search
MRIPVDASSSRRFTPPSATLSPGKMNEPLATPDNSAALLGKLRSSDRSMVEVLADHPGEL
VRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATA
AMKNQVAKFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQK
PDEQTKPGSLSFSERLSELEHLRRTAMRVSPHHPTPAPNPRAAFNHAAAFNSQQQSQIQD
PRPMQSSPPWSYDQSYQYLGSITTPSVHPSTPISPGRASGMTSLTAELSSRLSGASDLTA
FSDPRVGIDRQFSALPSISDARMHYPGVFTYTPTPVSSGIGIGMSAMSTATRCHTYLPPP
YPGSSQTQGNPFQTSSPSYHLYYGTSAGSYQFSMMSGGDRSPPRILPPCTNASIGSTLLN
PNLPNQSDMVEAEGSHSNSPTNLGTTARLEESVWRPY
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatccccgtagatgccagcagcagccgccgcttcacgccgccctctgccaccctc
agcccgggcaagatgaatgagccgctcgccaccccggacaacagcgccgccctgctgggc
aagctgaggagctcggaccgcagcatggtggaggtgctcgcagatcaccccggggagctg
gtccggaccgacagtcccaacttcctctgctcggtcctacccacgcactggagatgcaac
aagaccctgcccatcgccttcaaggtggtggccctgggagatgtccccgatggtacatta
gtcacggtgatggctggaaacgatgaaaactattcagcggaactccgtaacgccacagct
gccatgaagaaccaggtggccaagttcaatgacttgcgattcgtgggtagaagtggccga
ggaaaaagcttcaccctgactattactgttttcacaaatcctccacaagttgccacgtac
cacagagccatcaagatcactgtcgatggacctcgggagccaagacggcatcggcagaag
ccagatgagcagacaaagccaggaagcctgtccttttccgagcgtctgagtgagctggag
caccttcgtcgcacagcgatgagagtcagcccgcaccacccgaccccggcacccaacccc
cgggctgccttcaaccatgccgcagctttcaactcgcagcagcagagtcagatccaggat
cccagacccatgcagagttcgccgccatggtcgtacgatcagtcctaccagtacctggga
tctatcaccaccccctcagtccaccccagcacccccatttctcctggccgggccagtggc
atgacatccctcactgctgaactttccagccggctctcgggtgcttccgatctcacagcc
ttcagcgatcccagggtgggaattgaccgtcagttctccgcacttccctcaatctccgat
gctcgcatgcactatccaggagtgttcacctacaccccgacgcccgtctcctcaggaatc
ggaatcggcatgtctgccatgagcactgccacccgctgccacacctacctgccccctccc
taccctggctcttctcaaactcaagggaacccattccagaccagttcgccttcttatcat
ctctactatggtacctcagctggctcttaccaattctcaatgatgtctggaggggaccgc
tccccaccccgcatccttcctccttgcactaacgcttccataggctccaccctcctgaac
cccaaccttccaaatcagagcgacatggtagaggcggaaggcagccacagcaactcacca
accaatctgggtaccacggccaggttagaagaatctgtgtggcggccatattga
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integrated database retrieval system
