Geotrypetes seraphini (Gaboon caecilian): 117363134
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Entry
117363134 CDS
T09159
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117363134 (ZC3H12C)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117363134 (ZC3H12C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
Omega-toxin
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
117363134
NCBI-ProteinID:
XP_033806351
UniProt:
A0A6P8RLY4
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Position
6:39310336..39395176
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AA seq
855 aa
AA seq
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MGLNDHLEKDLGHVYVESTDACTSANVPWPMVEKTTMDKVNSRKVDVDKDASEETSSSSC
DSEESTNSDNEPEQSGGISAEPSQVTKAHRQLCRSRCLESHVLKHNEVLQDLKTEEVYES
LKEIKKPLDVVKEYQTKLEFALKLGYSEEQVQLVLHKLGTDALINDILGELVKLGNKSET
DQSINGSSNTTVMRETSSIESQRSESPIQEEVIDDYDNLKPVVIDGSNVAMSHGNKEVFS
CRGIKLSVDWFLERGHKDITVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRV
QGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMP
PDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGNQPQRSVADE
LRAMSRSTVAKAASEGGLVKSNSVPSSIKIDSTSDVKRTAPKRQSDPSIRTPVYQDLEEK
LPTKNKLETRSVPSLINIPNPSTAKPQSTAPSSNGIPSAVHFPSQEQRQQGQYPQIMMGT
KNHGSMLYDQYPKCDSPRDVGYLSVMNSYSHLSISGPRSPERRFSLDTDYRISSVASDCS
SEGSMSCGSSDSYVGYNDRSYVSSPDPQLEENLKCQHVQPHSRLNSQPFMPSYHDSLTRV
QSYGHEEPKHHKPPYTYMAVHLSHPVVGTCSSCPNDYPVSQGSPHSKNMHMGRSLVSTRI
ESISDSRLCESSPLRHRKPYSSQDGIGSWERHNYGIDVYGYRQTYSLPSNPSQPCYEQFA
FQSLPEQRDQIWRIPFYGGSQEPQRYQDAREKVYINLCNIFPADLVRIVMKKNPHMMDAQ
QLAAAILVEKSQLGY
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgaacgatcatttggaaaaagacctaggccatgtttatgtggaaagcaccgat
gcttgcacaagtgcaaatgtgccttggcccatggtagagaaaacaacaatggataaagtg
aactccagaaaggtggatgtagataaagatgcttctgaagagactagtagttctagttgt
gactcggaagagagcacaaattctgataatgaacctgaacaatcaggtggcatttcagcg
gaaccaagtcaggtaactaaggctcacagacaactgtgcaggtctcgctgtttagagtct
catgtactgaagcataatgaagtattacaggatttgaagacggaggaggtgtacgagtcg
cttaaagaaataaagaagccgcttgatgtggtaaaagaataccaaaccaaattggaattt
gcacttaaattaggttactctgaagagcaagttcagcttgtgcttcataaactcggtaca
gatgctttaatcaatgacattttgggtgaacttgtcaaacttggaaataagagtgaaact
gatcagtctattaatggcagtagcaatactacagtaatgcgggaaacatcttctatagag
tctcagaggtcggaatcccccatacaagaagaggtgatagatgactatgataacctgaaa
ccagtagtcatcgatggcagcaatgttgcaatgagtcatgggaacaaagaagttttttct
tgtcgaggaataaaactgtctgtagattggtttttggaaagaggtcataaagatattaca
gtgtttgtaccagcatggagaaaggaacagtcaagacctgatgccctcatcacagatcaa
gaaatcttgcgtaaactagagaaggagaaaattttggtgtttactccatctcgtcgggtt
caaggacggagagttgtgtgctatgatgacagattcattgtgaaattggcctttgaatca
gatggtatcattgtttctaatgacaactacagagacctggcaaatgaaaaacctgaatgg
aagaaattcattgatgaacggttgctgatgtattcatttgtcaatgacaaatttatgcct
cctgatgatcctcttggtcgccatggtccaagccttgataattttctgaggaagaaacca
attgttcctgaacataagaagcaaccatgcccatatggaaagaaatgtacctacggacat
aagtgcaaatactatcatccagaaaggggtaatcagcctcagcgatctgtagctgatgaa
cttcgtgctatgtctagaagcacagtggccaaagcagcaagtgaaggaggactggtaaaa
agtaatagtgttccttcaagtatcaaaattgatagcacttctgatgtaaaacgtactgct
ccaaagaggcaatctgatcctagcataaggactccagtctaccaagacttggaagagaag
cttcccaccaaaaacaagttggaaaccaggtctgtaccttctttaattaacataccaaat
ccttcaactgcaaaaccccaaagtactgcaccttcaagcaatggcattccttccgcagtc
cattttccatctcaagaacaaagacaacagggacaatatccacaaataatgatgggaacc
aaaaatcatggaagcatgctttatgaccagtacccaaaatgtgattcacctagggatgta
gggtatttgtctgtgatgaattcatattcacaccttagcatttctggaccacgaagtcct
gaaagacgcttttctttagacacagattacaggattagttcagtggcctctgactgtagc
agcgaaggaagcatgagctgtggcagcagcgattcatatgtgggttataatgatcggtcc
tacgttagttctcctgatccacaattagaagaaaatttgaagtgtcaacatgtgcagcct
cacagtcgccttaattcacaacccttcatgccaagttaccatgattctttaaccagagtg
caaagttatggccatgaggaaccaaagcatcataagcctccatatacctatatggctgtt
catctgtcgcatcctgttgttggtacctgctctagttgtcccaatgattatcctgtttct
cagggttcaccacattccaaaaatatgcatatggggagatccctagtatccacaaggata
gagagcatctcggattctcgattgtgtgaaagctctcctttaagacataggaaaccctat
tcaagccaagatgggattggaagttgggaaaggcacaattatggtattgatgtatatggt
tatcgccagacttattctttgcctagtaacccttcacaaccatgttatgagcagtttgcc
ttccaaagcttaccggagcagcgagatcagatatggaggatacctttttatggaggatca
caagaacctcagagatatcaggatgcccgggaaaaggtttacataaatctttgcaacatc
ttcccagctgatcttgtgaggattgttatgaaaaagaatcctcatatgatggatgctcag
caacttgctgcagccattttggtggaaaaatcacagctagggtattga
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