Geotrypetes seraphini (Gaboon caecilian): 117363189
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Entry
117363189 CDS
T09159
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117363189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117363189
Spliceosome [BR:
gsh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117363189
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
HHH_3
TMTC_DUF1736
Motif
Other DBs
NCBI-GeneID:
117363189
NCBI-ProteinID:
XP_033806480
UniProt:
A0A6P8RM48
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Position
6:24762407..24763897
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AA seq
496 aa
AA seq
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MSLADELLVDLEEAAEEEIFADEEDELALEDVQEEMQVDFSVDSVKSIAKLWDSRMFAAL
LEKIDEYVSQQPKSSEVMGPVEAAPEYRVIVDANNMTVEIENELNIIHKFIRDKYSKRFP
ELELLVSNALDYVRTVKELGNCLDKCKNNERLQQILTNATIMVVSVTASTTQGQQLAEEE
LGRIEEACDMALELNQYKHCIYEYVESRMSFIAPNLSVIVGASTAAKIMGIAGGLTSLSK
MPACNVMLLGAQRRTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKVARLVAAKCTLTA
RVDGFHEHPEGKVGYELKEEVEKKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMK
ERLGLTEIRKQANRMSLGEIEEDAYQEDLGFSMGHLGKSGSGRIRQAQVNEATKARISKT
LQRTLQKQSMVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVSEVNQKYFSSM
AEFLKVKGMKPSTMIK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcggacgagctgttggtcgatttggaggaggcagctgaggaggaaatcttt
gcagatgaagaggacgagctggccctcgaagatgtacaggaggagatgcaagtggacttt
agtgtggactctgtgaagagtatcgccaagttgtgggacagcaggatgtttgctgcgctc
ctggaaaagattgacgagtatgtctcccagcagccaaagtcctctgaagtgatgggaccc
gtagaggcagctcctgaatacagagtcatcgtggatgccaataatatgactgtggagatc
gagaatgagctgaatatcattcacaagtttatccgggataaatactccaagcggttccca
gagctggagttgctggtttccaatgctctggactatgtcagaacagtgaaggagctgggg
aactgtttggacaagtgtaagaacaatgagagacttcagcagatactgactaacgccacc
atcatggtggtgagtgtgactgcctccaccacacaagggcagcagctggcagaggaggag
ctggggcgcatcgaggaggcctgtgacatggcgctggaactgaaccagtacaaacactgc
atttacgagtacgtggagtcccgcatgtctttcatcgctcctaacctgtctgtcatcgtt
ggagcctccactgccgctaagatcatgggcattgccgggggtcttaccagtctctcgaag
atgcctgcttgtaatgtgatgctgctgggagcacagaggaggaccttatctggtttctcc
agtacctctgtattgccccacacagggtacatctatcatagcgatatcgtgcagtctcta
ccacctgatctacgcaggaaggttgcccgtctggtggctgccaaatgtacgttgacagca
agggtggacggtttccatgagcaccctgagggtaaggttggttatgagctgaaggaagag
gtcgagaagaagtttgacaaatggcaggagccacctccggtgaagcaggtgaaacctctg
ccggcacctctagatggacagaggaaaaagcgaggtggacgaaggtaccggaaaatgaag
gagcgcctggggctgacggagatccggaagcaggccaaccggatgagcttaggtgagatt
gaagaggacgcgtatcaagaagacctagggtttagcatgggacacctgggaaaatcgggg
agtggcaggatccgacaggcacaagtcaatgaggccacaaaagccaggatctccaaaacg
ctgcagcgcactctacagaagcaaagcatggtgtatggagggaaatcgactatccgggac
cgttcctcagggacagcatccagcgtagccttcacacctctgcagggcttggaaattgtg
aatccacaggcggctgagaagaaagtgtctgaagtgaaccaaaagtatttctccagcatg
gctgagttcttgaaagtcaaagggatgaaacccagcaccatgataaagtga
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